Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4503 |
Symbol | |
ID | 5750091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4927811 |
End bp | 4928527 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641299604 |
Product | aspartate racemase |
Protein accession | YP_001565517 |
Protein GI | 160899935 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1794] Aspartate racemase |
TIGRFAM ID | [TIGR00035] aspartate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0141875 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCAA ACCACACGGA AATTCACCGC GTCATCGGTC TCATCGGTGG CATGAGCTGG GAGTCCAGCG CCGAGTACTA CCGGCTCATC AATCAGGGCG TGCGTGACAG GCTGGGTCCG CTGCGCTCCG CAAAACTGCT CATGTACAGC GTGGATTTTG GCCCCATCGA GCAGGCCCAG CATGAAGGCC GATGGGACGA CGCCGCCGCC TTGCTGGAAG ATGCCGCGCG GCGGCTGCAG CAGGGCGGGG CGGACGGCGT GCTGCTGTGC ACCAACACCA TGCACAAGCT GGCAGACCGC ATTGCGGCAG CGGTGCGCAT CCCTTTTCTT CACATTGCCG ACCCGGTAGC CGACGCAGCC CGCACACGCG GCTACCGGAA GCTGGGGCTG CTGGGCACAC GCTTCACCAT GGAGCAGCCC TTCATGCGCG AGCGGCTGCA GCAGCAGGGT CTGGAGGTGC TGGTGCCGCA GGAGGCAGAC CGCGCCGAGG TGCACCGCAT CATCTACGAG GAACTGTGCA CGGGTCGGAT TCTTGAAGAG TCGCGGCGCA CGTATCAGCG CATCATGGCG CAGCTGGCCG GGCAGGGTGC GCAGGCCATG GTGCTGGGCT GCACGGAAAT CAGCCTGCTG GTGCAGCAGG AGCATTGCCC TGTGCCCGTG CTGGATACCA CCGCCCTGCA TGCGCAGGCG GCGGTGGACT TCGCTCTGGA GCCTTGA
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Protein sequence | MNSNHTEIHR VIGLIGGMSW ESSAEYYRLI NQGVRDRLGP LRSAKLLMYS VDFGPIEQAQ HEGRWDDAAA LLEDAARRLQ QGGADGVLLC TNTMHKLADR IAAAVRIPFL HIADPVADAA RTRGYRKLGL LGTRFTMEQP FMRERLQQQG LEVLVPQEAD RAEVHRIIYE ELCTGRILEE SRRTYQRIMA QLAGQGAQAM VLGCTEISLL VQQEHCPVPV LDTTALHAQA AVDFALEP
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