Gene Daci_4503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4503 
Symbol 
ID5750091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4927811 
End bp4928527 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content65% 
IMG OID641299604 
Productaspartate racemase 
Protein accessionYP_001565517 
Protein GI160899935 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1794] Aspartate racemase 
TIGRFAM ID[TIGR00035] aspartate racemase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0141875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCAA ACCACACGGA AATTCACCGC GTCATCGGTC TCATCGGTGG CATGAGCTGG 
GAGTCCAGCG CCGAGTACTA CCGGCTCATC AATCAGGGCG TGCGTGACAG GCTGGGTCCG
CTGCGCTCCG CAAAACTGCT CATGTACAGC GTGGATTTTG GCCCCATCGA GCAGGCCCAG
CATGAAGGCC GATGGGACGA CGCCGCCGCC TTGCTGGAAG ATGCCGCGCG GCGGCTGCAG
CAGGGCGGGG CGGACGGCGT GCTGCTGTGC ACCAACACCA TGCACAAGCT GGCAGACCGC
ATTGCGGCAG CGGTGCGCAT CCCTTTTCTT CACATTGCCG ACCCGGTAGC CGACGCAGCC
CGCACACGCG GCTACCGGAA GCTGGGGCTG CTGGGCACAC GCTTCACCAT GGAGCAGCCC
TTCATGCGCG AGCGGCTGCA GCAGCAGGGT CTGGAGGTGC TGGTGCCGCA GGAGGCAGAC
CGCGCCGAGG TGCACCGCAT CATCTACGAG GAACTGTGCA CGGGTCGGAT TCTTGAAGAG
TCGCGGCGCA CGTATCAGCG CATCATGGCG CAGCTGGCCG GGCAGGGTGC GCAGGCCATG
GTGCTGGGCT GCACGGAAAT CAGCCTGCTG GTGCAGCAGG AGCATTGCCC TGTGCCCGTG
CTGGATACCA CCGCCCTGCA TGCGCAGGCG GCGGTGGACT TCGCTCTGGA GCCTTGA
 
Protein sequence
MNSNHTEIHR VIGLIGGMSW ESSAEYYRLI NQGVRDRLGP LRSAKLLMYS VDFGPIEQAQ 
HEGRWDDAAA LLEDAARRLQ QGGADGVLLC TNTMHKLADR IAAAVRIPFL HIADPVADAA
RTRGYRKLGL LGTRFTMEQP FMRERLQQQG LEVLVPQEAD RAEVHRIIYE ELCTGRILEE
SRRTYQRIMA QLAGQGAQAM VLGCTEISLL VQQEHCPVPV LDTTALHAQA AVDFALEP