| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4442 |
|---|
| Symbol | |
|---|
| ID | 5750030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 4863332 |
|---|
| End bp | 4864228 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641299544 |
|---|
| Product | xylose isomerase domain-containing protein |
|---|
| Protein accession | YP_001565457 |
|---|
| Protein GI | 160899875 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.481875 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.31172 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTTGC TGGACAGCTA TGGCATGGAC ACCATCACTC TGAATGGCTC GCTGGAGGCC
AAGCTCGACG CCATACGGCG CGCGGGCTTC ACCCAGGTCA TGCTCAGCGC GCGCGACCTG
GCCGGCCACC CGGGCGGCGT CAAGGCGGCA GCGGCGGCCG TGCGCGCCAG CGGCCTGCGG
CCCACGGGCT TTCAGGTGCT GCGCGACTTC GAGGGCCTGT CCGACCACCT GCACCACTAC
AAGGTGGACA TCGCCAAGTC CATGCTGGAG ATGTGCGCCG AGATCGGCAG CCCCGTGCTG
CTGGCCTGCT CGTCCACCTC GCGCCATGCC ACGGGCGATC TCGACGTGAT TGCGCGCGAC
CTGCGCAAGC TGGCCATGCT CGGCATTCCG CTGGGCGTGA AGATCGCCTA CGAGGGGCTG
TCCTGGGGCC GCTCCGTCAA TGAGTTCACC ACCAGCTGGG ACGTGGTCTG CCGTGCCGAC
ACGTCCAACC TGGGCATTGG GCTGGACTCC TTCCACATCC TGGCGGCCAA GACGCCGCTG
GACGCGCTGG AGCTGATCGA CCGCGACAAG ATCTTCCTCG TGCAGCTGTC CGACTTCATG
TGGCACGACG CGCCCACCTT CGAGGAACGC ATGGCCACGG CGCGCACCTT CCGCGTGTTC
CCGGGCGAGG GCGTGCACAG CGAGCGCCTG GCCGACCTGG TGCTGCGCCT GGACCGCCTG
GGCTACCGGG GCGACTACAG CTTCGAGGTC TTCAACGACG ACTACCAGCA ACTGCCGCTG
GACACCGTGG CCGAGCGCGC GCGCCGCAGC GCGCAGTGGC TCAACGACGA CGTGCTGCAC
CGGCCCGTGC CGCTGCCGGC CTGGGCGCGC ACGGGCGTGC GGGGCACGTC GGTTTGA
|
|---|
| Protein sequence | MGLLDSYGMD TITLNGSLEA KLDAIRRAGF TQVMLSARDL AGHPGGVKAA AAAVRASGLR
PTGFQVLRDF EGLSDHLHHY KVDIAKSMLE MCAEIGSPVL LACSSTSRHA TGDLDVIARD
LRKLAMLGIP LGVKIAYEGL SWGRSVNEFT TSWDVVCRAD TSNLGIGLDS FHILAAKTPL
DALELIDRDK IFLVQLSDFM WHDAPTFEER MATARTFRVF PGEGVHSERL ADLVLRLDRL
GYRGDYSFEV FNDDYQQLPL DTVAERARRS AQWLNDDVLH RPVPLPAWAR TGVRGTSV
|
|---|
| |