| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4426 |
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| Symbol | |
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| ID | 5750014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4846995 |
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| End bp | 4848665 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641299528 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001565441 |
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| Protein GI | 160899859 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.169116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.480332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAA GACGCTTCCT GCCTCGCCTT TCCCTGCTGC GCACCCACTT GCGCACCCTG
CGAATTTCCG CACTGCTTCC CGCCCTGGCC GCAGCCCTGC TGTGCGCACC GCCCGCCCAG
GCCGAAACCC TGCGCTGGGC GCGCTCCACC GACGCATCCA CGCTGGACCC GCATGCGCTG
AACAACGGCC CCAACCACAA CCTGCTGCAT CAGATCTACG AGCCGCTGAT CATCCGCACG
GCCGATGGCA AGCTGCTGCC CACCCTGGCC ACGTCCTGGG CGCTGACTGC CGACCCCTCG
GTCTGGGAGT TCAAGCTGCG CAAGGGCGTG AAGTTCCATG ACGGCAGCCT GTTCACGGCC
GACGACGTGC TGTTCTCGCT GCGCCGCGCG CGCTCGGCCA CCTCGGACAT GCGCTCGCTG
CTGACCTCGA TCACCGACGT GACCAAGGTC GATGCCTTCA CCGTGCACAT CAGGACCAAC
GGACCCAACC CGCTGCTGCC GGCCAGCCTC ATCAACATCC AGATCTTGAG CGCCGCCTGG
GCCAAGGCCC ATGGTGCCGA GCAGCCGCAG AACGCGCTGG CCAAGGAAGA GAACTACGCC
ACGCGCAACG CCAACGGCAC GGGGCCCTAC GTCATCGCCT CGCGCGAGCA GGACACGCGC
ACCGTGCTGC GGCAGTTTCC CGGCTACTGG GGCAAGGGGC TGTTCCCGCT GGAAATCGAC
GAACTGGTCT ACCTGCCCAT CAAGTCCCAG GCCACGCGCG TGGCGGCGCT GCTGTCGGGC
GAGGTGGACT TCGTGCAGGA CCTGCCCATC CAGGACATTG CGCGCCTGAG CGCCGACCCG
CGCTTTCGCA TCAACCAGGC CGCCGAGAAC CGCACCATCT TCCTGGGTCT GAACGTGGGC
GCCGCCCCGC TGTCGCATTC CGATGTGAAG GACAAGAACC CCCTGGCCGA CCTGCGCGTG
CGCCAGGCCT TCCAGCTGGC CATCGACCGG CAGGCCATAC AGCGCGCCGT GATGCGCGGC
CTGTCCGTGC CCACCAACAT CATTGCGCCG CCCTTTGTGC ACGGCTACGA GAAATCCTTT
GGCGCCGTGG GCAAGGCCGA CCTTGTCCAG GCCAGGAAGC TGCTGGCCGA GGCCGGCTAT
CCCAACGGCT TCGGCATCAC CCTGCATTGC ACGAACGACC GTTATCTGAA CGACGAGGCC
ATCTGCCAGG CCATCGCCGG CTTTCTGGGC CGCATCGGCG TGAAGACCGC CGTGTCGTCG
CGGCCGCTGG CCATCCAGAC GGCGGCCATC AACAACCAGG AGACGGATTT CTACCTCTAC
GGCTGGGGCG TGCCCACCTA TGACTCGGCC TATGTCTTCG ACTACCTGGT GCACACGCGC
GGCAAGAACG GCCGGGGCAA CACCAATGCC ACGCGCTACA GCAATGCCGA GCTGGACAGC
CAGATCGTCT CCCTGGCCTC CGAGGGCGAT GCGCGCAAGC GCGATGCCAC CATCCACTCC
ATCTGGAGCA CGGTGCAAAA GGAGCTGATC TACCTGCCGC TGCACGACCA GATCCAGACC
TATGCCATGG TGCGCAAGTT CGACATCCCG GTGAATCCGT CGAACACGCC TTACTTCAAG
CTGTTCAAGC AGCCCGGTGC GCGCCAGGCT GCGGTGGCCG GCGCGCAGTA G
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| Protein sequence | MTQRRFLPRL SLLRTHLRTL RISALLPALA AALLCAPPAQ AETLRWARST DASTLDPHAL
NNGPNHNLLH QIYEPLIIRT ADGKLLPTLA TSWALTADPS VWEFKLRKGV KFHDGSLFTA
DDVLFSLRRA RSATSDMRSL LTSITDVTKV DAFTVHIRTN GPNPLLPASL INIQILSAAW
AKAHGAEQPQ NALAKEENYA TRNANGTGPY VIASREQDTR TVLRQFPGYW GKGLFPLEID
ELVYLPIKSQ ATRVAALLSG EVDFVQDLPI QDIARLSADP RFRINQAAEN RTIFLGLNVG
AAPLSHSDVK DKNPLADLRV RQAFQLAIDR QAIQRAVMRG LSVPTNIIAP PFVHGYEKSF
GAVGKADLVQ ARKLLAEAGY PNGFGITLHC TNDRYLNDEA ICQAIAGFLG RIGVKTAVSS
RPLAIQTAAI NNQETDFYLY GWGVPTYDSA YVFDYLVHTR GKNGRGNTNA TRYSNAELDS
QIVSLASEGD ARKRDATIHS IWSTVQKELI YLPLHDQIQT YAMVRKFDIP VNPSNTPYFK
LFKQPGARQA AVAGAQ
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