Gene Daci_4409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4409 
Symbol 
ID5749997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4826272 
End bp4826676 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content52% 
IMG OID641299512 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_001565425 
Protein GI160899843 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.765938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAACATG ATCGCAGCGG CCAAATGCCG TTACAAAACG AGCAGCAGAT TGTTGCCACG 
CGCCAAACGG TGCGCTCGCT TTGCCAGATG CTGAAGTTCT CGCTGGTCGA TCAGACAAAG
ATGATTACCG CTGCAAGCGA GCTGTCCCGC AATACGCTGA TTCATGGAAA AGGTGGCCAC
ATGAACTGGG CCATCATCGA AGTCAATGGA AAACAGGCCT TGCAATTGAT TTTTGAAGAC
ACAGGGCCTG GAATCAAGGA TCTGAAAATG GCCATGACCG ATGGTTTCAC CACCGGCATG
GGAATGGGCC TGGGCCTGCC GGGAAGCAAG CGGCTGGTGA ATGATTTCAA GATAGAAACC
GAGCTGGGTC AGGGCACACG AGTGAGTATC ACCAAGTGGA AGTAA
 
Protein sequence
MEHDRSGQMP LQNEQQIVAT RQTVRSLCQM LKFSLVDQTK MITAASELSR NTLIHGKGGH 
MNWAIIEVNG KQALQLIFED TGPGIKDLKM AMTDGFTTGM GMGLGLPGSK RLVNDFKIET
ELGQGTRVSI TKWK