Gene Daci_4365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4365 
Symbol 
ID5749953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4778667 
End bp4782863 
Gene Length4197 bp 
Protein Length1398 aa 
Translation table11 
GC content70% 
IMG OID641299468 
Productserine/threonine protein kinase 
Protein accessionYP_001565381 
Protein GI160899799 
COG category[R] General function prediction only
[K] Transcription
[T] Signal transduction mechanisms
[L] Replication, recombination and repair 
COG ID[COG0515] Serine/threonine protein kinase
[COG3899] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.161943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.271622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCATTCGG ACGTACGCTA TAGTAACGAA CGGTATCAAA AGCACGGTCT GCCGTATGAC 
AAATGGACGA CTGGATACCC TCCAGGAGGA CCCCCAACCG AGGCTGAAAT GCACGATGCC
ATCACCAACC CCACGCAAGC TGCGGTGACC CCGGTGGCGC CAGCCCCCCT GGAAATACCC
GATTACGAAC TGCTGGAAAC CTTGGGATCG GGTGGCTACG GCACCGTCTA CCGCGCGCGC
CACCGGCGCA CGGGTGCATC GGTGGCCATC AAGGTCGTCA GGCTGCAGGA AGGCGGCCGC
CAGGTGGAGC GCTTCCACCG CGAGACCATG CTGTGCGCGT CCCTGCACCA TCCGCACATC
GTCCAGTTGC TGGACAAGGG CGAGCAAGGC GACTGCGTCT ACGGCGTCTT CGAATATGTG
CCCGGCGAGA CCCTCAAAAG CCTGATCCGC CGCCAGGGCG TGCTGACGGC GGCCGAGGCC
GGCCGCCTCA TGGCCGAGGT GCTCGATGCG CTGGACTGCG CGCATGCCGC CGGCATCGTG
CACCGCGACC TCAAGCCTGA CAACGTGATG GTCACCTCCA CGGGCGCCGT GCGGCACGCC
ATGGTTCTGG ACTTCGGCAT CGGCACCGTC ATTCCGCAGT TTGCCGGCCC GCAGGTCTCG
CAGCTCACCA TGGGCGACGA GTGCCTGGGC ACGCCTGCCT ACAGCGCCCC CGAGCAGCTG
CGCGGCGAGC CGCCCAGCGC CCGCACCGAC CTGTATGCCT GGGGGCTGAT GTTCCTTGAA
TGCCTGACGG GCACGCCCGC CGTGCAGGGT GCCTCGGTGG CCGAGATCGT GCACCGCCAG
CTCAGCCCGC AGGAAGTGCA GCTGCCGCCG GCCATCTCCA CCCACCCCAT CGCCACCTTG
CTGCGCAAGG CGCTCAAGAA GCGGCCCGCG GAGCGCAGCG ACTCGGCGGC GGCCCTGCTC
AGGGACCTCA TGCGCGTGCG GCTGGACGAT CTGGTGGGCC AGTTGCCCGC CGCCGCCCAG
GTGCAGCAGG CGGACCTGAC ACGCACCGTG GCCACCACAC GGGTGTTCTC CGAAGTGCGC
CAGCTCACCG TGCTGTGCTG CAGCGTCTCC CTCTGGCCGG GCAGCGATAC CCACGGCATG
GACGGCACGA CGGGCACCTC AAGCCAGCCC TCGCAGGGGC TGAACATCGA AGACATCGAA
CTGCTGCAGC GCGAGGAACT CACGCTGTTC TCCGACGTTG CCACCCGGCG CGGAGGCATG
CTGGCGGGCA CGCTGGGCGA CCGCATGCTG GTGCTCTTCG GCTACCCGCA CACCAGCGAC
ACCGATGCCC GCCAGGCCGG CATGACGGCG CAGGAGCTGC TGACGCTCAG CCGCAGCCGC
GCGGCCGCCA TCGAGCAGGT CCACGGACTG CACCTGGGAA TCCGCATGGG CCTGCACACC
GGCATGGCCG TGGTGGTCGG CGGCGAAGCG CCCTCGGGCC ATGCCGTCAA CGTGGCCATG
CGGCTGGAGG CCATCGCCGA TGCGGGCACC CTGCTGGCCA GCGAAAGCAG CCATCGCCTG
CTGGCCCGCC ATGCGCGCTT CGAGAAAGCC GGCAGCCTGC GCCTGCCCGG CCAGCCCACG
GGCATGCAGA CCTATCGCCT GGAGCTGGAA CAGCCGGCCG AGCCACTGCC AGGGCCTGTG
TCCGATGCGG CCTTGCAGTG CATAGGCCGC GAACCCGAAC TGCAGCGCCT GCACGACGCA
TGGGCGCGGG CCCGCGAAGC AGGGGGCAAT GCGCTGTGGA TTCGCGGCGA GCCGGGCATC
GGCAAATCCT GCCTGGCCGA CATGCTGCTC GTCCACGCCA GGGCACAGGG CGCAAACACC
GTGGTGCTGC AATGCCAGCC CGAGCACCGC AACACCGCGC TGACCCCTTT CCTGGGCCTG
ATACGGCAGC GGCTGGAGTC GGCCGATCCC CCGCAGGACC ACCGCGAGCA GATGCGCGAA
GCCCTGCGCG CCGCAGGCTG CGATGCCGAG GCCGCCCTGC CCATTCTGTG CGCCTGGCTC
TCGCTGCCCC TGGGCGACTG CGAGCCCAGC CGCATCTCGG CCGTCATGCA AAGGGCGCTG
CTGCTGCAGT CCACCGCGCA ATGGCTGCTG CACATGTCCG AAGCCGAGCC CCTGCTGCTG
GTCGTCGAAG ACGTGCACTG GGCCGACCCC ACCAGCATCG AACTGCTGGA GCAACTGGTA
GCGCGCCTGC CCGGGCGGCG CGTGCTGCTG GTGCTGACGG CGCGGCCGCA ATGGCAGCCG
CCCGAAGGCC TGCAGGCCGA GTGCGTGGAC GTGCGGCGCC TGGAAGACGC CCAGGCCACC
GAGCTGGCCC GCCAGACGCT GGCGCCGCGC AGGCTCAGCC CCGCCGTGAT CCGCCACGTG
GTGGAGCGCA CCGACGGCGT GCCGCTGTTC ATCCAGGAAA TGGCGCGCAT GCTGCTGGAT
GCCCACCTGG TGGAGCAGGA CGGCGTCTGG GACTTTCGCC ATGCCGGGCT GCCGGCCGCC
ATTCCGCTGA CCCTGCGCGA CTCGCTGGTC AGCCGCTTTG ACCGCATCGG CCCGCTCAAG
CCGCTGCTGC AACTGGCCGC CACCATGGGC CGGCACTTCG ACTTCGGCCT GCTGTGCGCC
TGCGTGGAAC GCCCGCAAGG CGAGGTCGAG CAGGAACTGG CGCAGCTGGG CCAGGCCGGC
CTGGTCATTG CCGATGAACG TGCGGGCGCC GGCGCCTTCA TGTTCCGCCA CGCGCTGATC
CGCGATACGG CCTACGAATG CATGCTGGCA TCGCAGCGCC GGCTGCTGCA CCGCGACGTG
GCCCTGGCCC TGATGCAGCA CCAGCCCCAG CGCGTTGCCG CAGAACCCGC AGGCGTGGCC
CAGCACTGGG CAGACGCGGG CGACCATGCC CAGGCCGTGG CGCTTGCGGT GCGGCAGTTG
CGCATCACGC AGCTGCGCTC GCTCAACGAT GAAACCATTG CCTACGCGCG CCACATCGAC
GACTGGCTGC ACCAGCTCCA GGGCGTGGCC CAGCGCGAGG CGCGGCTGGA CGTCAACAGC
TACGTGACCC AGGCGCTGAT GAACAAGCAC GGCTGGGCCC ATGCCCAGGT GGTGGAAAGC
ATCGCGCTGT CGCAGGAGCT GCTGGCCGGC CCCGGCGCCA ACGCGGTGGC CGACTACAAG
CAGGTGCAGC ACCTGTGGAT GCTGATCACC TACCACCATG TGGCCAGCAA CCGCGAGGAA
GTGCGCCAGC TCAGCCGCCG CCTGCTGGAG CAGGCCGTGC GCCAGCAGGA CACGGGCGTG
CTGGTGGCCG CGCAGACCTA CCTGGGCCTG GCCCACTACT CCGACGGCCG ATTCGAGCAG
GCCGAAGAAG CGCTGACCGA CGCCATCACC CGCTACGACC CCGTGGCCCA TGCCCACCAT
GCGGCCGAGT TCGGCTTCGA CACGCGCGTC TGGGCCACCT GCGGGCGCGC CCTGGTGCGC
TGGTTCGCCG GCTTCGACCA GGCCGCGCTG GCCGATGCGA ACGACGCCGT GCGCCTGGCG
CACGAGGTCT CGCACATCCC CTCCCTGAGC ATGGCCCTGC TCTACCAGGC CCTGGTCCAC
CAGGCGCGTG GCGACAAGGA AAGCGCCTTG GCCACCACGG GCGAGCTGCT GGACATCACG
GCCCGCTACG GCCTGCCCGC GTTCTCGGGC TATGCGGACA TCATCCGCTG CTGGGCGCTG
GGTGACAGCG CAGGCAGCGC CAGCGCCGAG GGCATTGAAC GCGCCAGCGG CACGGCGCAG
CTGCTCTGGG ACATGGGCTG CCGCTACTGC CAGACCTACT ACCGCTCCTT CGTCGCCGAA
ATGCTGGCGG CCAGCGGGCG CTGGACCGAA GCCCTGGACA AGATCGACGA ATGCCTGCGC
CTGGCCGACG TGCTGGACGA ACGGCTGCAC AGCAGCGAGC TGCACCTGAA GAAGGCCCGC
TTCCTGCTGG CCATGGGCGC CGACCACGCA GCCGTGCAGG ACAGCCTGGC CCAGGCGGCA
GGGACTGCGC GCACCGCCGG CAAGCACCGC ACCGAAACCG AGGCGCTGGT CCTGTCGCTG
GCCCTGGCAC CCGCCAGGCC GGACGTGGCC GCGCGCCTGA GTGAGCTGGC CGCATTGCGG
CCTGAACTGT CCGTGCTCCT GTCCGGGCCT CTGCCCGGCC AGGCGCATTT ATCTTGA
 
Protein sequence
MHSDVRYSNE RYQKHGLPYD KWTTGYPPGG PPTEAEMHDA ITNPTQAAVT PVAPAPLEIP 
DYELLETLGS GGYGTVYRAR HRRTGASVAI KVVRLQEGGR QVERFHRETM LCASLHHPHI
VQLLDKGEQG DCVYGVFEYV PGETLKSLIR RQGVLTAAEA GRLMAEVLDA LDCAHAAGIV
HRDLKPDNVM VTSTGAVRHA MVLDFGIGTV IPQFAGPQVS QLTMGDECLG TPAYSAPEQL
RGEPPSARTD LYAWGLMFLE CLTGTPAVQG ASVAEIVHRQ LSPQEVQLPP AISTHPIATL
LRKALKKRPA ERSDSAAALL RDLMRVRLDD LVGQLPAAAQ VQQADLTRTV ATTRVFSEVR
QLTVLCCSVS LWPGSDTHGM DGTTGTSSQP SQGLNIEDIE LLQREELTLF SDVATRRGGM
LAGTLGDRML VLFGYPHTSD TDARQAGMTA QELLTLSRSR AAAIEQVHGL HLGIRMGLHT
GMAVVVGGEA PSGHAVNVAM RLEAIADAGT LLASESSHRL LARHARFEKA GSLRLPGQPT
GMQTYRLELE QPAEPLPGPV SDAALQCIGR EPELQRLHDA WARAREAGGN ALWIRGEPGI
GKSCLADMLL VHARAQGANT VVLQCQPEHR NTALTPFLGL IRQRLESADP PQDHREQMRE
ALRAAGCDAE AALPILCAWL SLPLGDCEPS RISAVMQRAL LLQSTAQWLL HMSEAEPLLL
VVEDVHWADP TSIELLEQLV ARLPGRRVLL VLTARPQWQP PEGLQAECVD VRRLEDAQAT
ELARQTLAPR RLSPAVIRHV VERTDGVPLF IQEMARMLLD AHLVEQDGVW DFRHAGLPAA
IPLTLRDSLV SRFDRIGPLK PLLQLAATMG RHFDFGLLCA CVERPQGEVE QELAQLGQAG
LVIADERAGA GAFMFRHALI RDTAYECMLA SQRRLLHRDV ALALMQHQPQ RVAAEPAGVA
QHWADAGDHA QAVALAVRQL RITQLRSLND ETIAYARHID DWLHQLQGVA QREARLDVNS
YVTQALMNKH GWAHAQVVES IALSQELLAG PGANAVADYK QVQHLWMLIT YHHVASNREE
VRQLSRRLLE QAVRQQDTGV LVAAQTYLGL AHYSDGRFEQ AEEALTDAIT RYDPVAHAHH
AAEFGFDTRV WATCGRALVR WFAGFDQAAL ADANDAVRLA HEVSHIPSLS MALLYQALVH
QARGDKESAL ATTGELLDIT ARYGLPAFSG YADIIRCWAL GDSAGSASAE GIERASGTAQ
LLWDMGCRYC QTYYRSFVAE MLAASGRWTE ALDKIDECLR LADVLDERLH SSELHLKKAR
FLLAMGADHA AVQDSLAQAA GTARTAGKHR TETEALVLSL ALAPARPDVA ARLSELAALR
PELSVLLSGP LPGQAHLS