Gene Daci_4354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4354 
Symbol 
ID5749942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4769025 
End bp4770008 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content67% 
IMG OID641299457 
Producthypothetical protein 
Protein accessionYP_001565370 
Protein GI160899788 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.110423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.165755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGCC AACTGATCAC CTGCACCGCC GTGGCCGCCG CCATGGGCCT GAGCTTTTCC 
GCAGCCGCCC AAGGCACGGC GGCCGACTAT CCGAACAAGC CCGTGCGCAT GATCGTGCCC
TTCCCGCCCG GCGGCGGCAC CGACATCCTC GCGCGCGTGG TGTCCAACAA GCTCACCGAA
GTCAGCAAGT GGACTGTGGT GCCCGACAAC CGCGCGGGCG CAGGCGGCAC CATCGGCATC
ACCGAGGCCG CCAAGGCAGC GCCCACGGGC TACGACATGG TCATGGGCCA GAAGGACAAC
GTGGTCCTGG GCCCCTACCT CTACAAGAAC CTGCCCTGGA ACCCGGTCAA GGACCTGGTG
CCCGTGGCCC ACGTGGCCTA CACGCCCATC GTGATCGCCA CCAGCGTGAA CTCGCCCTAC
AAGACCCTGG CCGACATCGT GGCCGCTGCC AAGCAGCACC CGGGCAAGGT GACCTACGGC
TCGCCGGGCA ATGGCACCAG CATCCACATC TCGGGCGTGC TGCTGGAGAA GGCGGCGGGC
ATCCAGCTGG TGCATGTGCC CTACAAGGGC TCCAACCCGG CCCTGATGGA CGCGCTGGCC
GGCAACGTGG ACCTGCTGGT GTCCTCCGTG CCCTCGGCCA TCGGCCAGAT CAAGGCCGGC
AAGCTGCGCG CCATCGCCGT CACATCGGCC AAGCGCTCGT CCTCGCTGCC CGACACGCCC
ACGCTGGCCG AAGCGGGCCT CAAGGGCTTT GACGTGAGCA CCTGGTACGG CCTGTTCATG
CCCAAGGGCA CGCCAACGGC CATCGTGACC AAGGTCAACG CCGAAGTGAA CAAGCTGCTG
GCCATGCCCG AAGTGCGCGA CGCCATCCAG ACCCAGGGCG CCGAACCCCA GTCCATGAGC
GTGGCCGACT TCGACAAGAT GTTCCAGGCC GACTTCAAGC AGTCCAAGCA GATCGTCGAG
TCCTCGGGCG CCAAGATCGA GTGA
 
Protein sequence
MFRQLITCTA VAAAMGLSFS AAAQGTAADY PNKPVRMIVP FPPGGGTDIL ARVVSNKLTE 
VSKWTVVPDN RAGAGGTIGI TEAAKAAPTG YDMVMGQKDN VVLGPYLYKN LPWNPVKDLV
PVAHVAYTPI VIATSVNSPY KTLADIVAAA KQHPGKVTYG SPGNGTSIHI SGVLLEKAAG
IQLVHVPYKG SNPALMDALA GNVDLLVSSV PSAIGQIKAG KLRAIAVTSA KRSSSLPDTP
TLAEAGLKGF DVSTWYGLFM PKGTPTAIVT KVNAEVNKLL AMPEVRDAIQ TQGAEPQSMS
VADFDKMFQA DFKQSKQIVE SSGAKIE