| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4352 |
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| Symbol | |
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| ID | 5749940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4763547 |
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| End bp | 4767410 |
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| Gene Length | 3864 bp |
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| Protein Length | 1287 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641299455 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001565368 |
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| Protein GI | 160899786 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.06083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACTCAG AAGACAGTTT TCGATTCCTG CCGCAGCGCG GCGAAATGCC GGCACGCGTG
CGTTCCCACG ACTGGGCGGC CACGCCCCTG GGATCGCCGG ACGGCTGGCC GCAGAACCTG
CGCAACGCCG TGAGCCTTGC GCTGGGTTCG CGCTTTCCCA TCACCATCTG GTGGGGCGAA
GACTTCCGCC TGATCTACAA CGATGGCTAT ATCCCCTTCC TGGGAACCAG CAAGCACCCC
CAGGCGCTGG GCCAGGCCGG CGCGCACTGC TGGAGCGAGA TCTGGAGCGA TATCGGCCCC
ATGCTGGAAG GCGTGATGCG TACCGGCGAG GCCACCTGGT CCACCGACGC CCGCTACTTC
TTCGACCGCG ACCTGCCGCA GGAAGAAGTC TTCGTGACCT TCACCTACGG CCCCATCCTG
GCCGATGACG GCGTCACCGT GCAGGGCGTG TTCTGCCCCT GCACCGAGAC CACGGAAAAA
ATCGTCAGCC GCAGGCGCCT GGAGACGCTG CACCGCCTGG GCATACGCAC GCTGGACATG
CACAACGCCA GGGACGCCGC CCAGAAAGTC TGCGCCGTGC TGGACGAGAA CCCCTACGAC
GTGCCCTTCG CCATCATCTA CGAATGCGTG GACACCCCTG CCGCGGGCAG CGCAGGCGAC
AGCGGCCCGG CCTTCAGGAT GCTCTGCGCC ACGGGCATGG ATCTGGACAT GGACCTGGCG
GCCGACCCCT CGCGCTGGCC GCTGGACCGG GCCGTGCAAT CCGATCCATC TGACCGAGCG
GACCTAACGG ACCAGGCGCA TCAGGCGGCC CAACCGGGCC AGCCCGTCAA TGTGGAACTG
GCGTCCCTGG GCCTGTTCCT GCCCGGCGGC CCCTGGCCCG AGGCCTCGCG TCTGGCGCGC
ATCGTGCCTG TGCGCTGGTC GGGCGACGGC CAGGTCTCGG GCGTGATGGT GCTGGGCGTC
AGCCCGCGCC GCCCGCTGGA TGTGGACTAT TGCGCCTTCC TCGACATGGT GGCAAGCCAC
ACGGGCAGCG TGGTCGCGCA CGCCCAGGCC TACGAGCAGG AAGCACGGCG CGCCAAGGCC
CTGGCCGAGG TGGACCACGC CAAGACCGTG TTCTTCTCCA ACATCAGCCA CGAGCTGCGC
ACCCCGCTGA CGCTGATCCT GGGCCCGCTG GAAGATGCCC TGCGCGAGCA CGGCGGCCAG
GTGCCGGCCG GGCAGACGCA GATGATCCAC CGCAACGCGC TGCGCCTGCA AAAACTGGTC
AACGCCCTGC TGGACTTCTC GCGCATCGAG GCCGGGCGCA TGCAGGCCAG CTACGAGCCC
ACGGACCTGG CCCGCACCAC GGCCGAGCTG GCCAGCATGT TCCGCTCGGC CGTGGAGCAA
GCCGGCCTGC GGCTGCGCGT GGATTGCCCG CCGCTGGACG GACCGGTCCA TGTGGACCGC
GACATGTACG AAAAAATCGT GCTCAACCTG CTGTCCAACG CCTTCAAGTT CACGCTGCAA
GGCGAAATCG CCGTGGCGTT GCGCGATGTG CCCGATGTGC ACGATGCGCA CGGCGCGGGC
GGGGCCAATG GTGCGGTGGA GCTGTCCGTC ACCGACACCG GATCGGGCAT TGCGCCCCAG
CACCTGCCCC ATCTCTTCCA GCGTTTTCAC CGCATTCCCG GCAAGCCGGC CCGCACGCAC
GAGGGCACGG GCATCGGCCT GGCCATGGTG CAGGAGCTGG CTCGGCTGCA TGGCGGCACC
GTCACGGTCA GCAGCACGGA GGGCGAAGGC AGCCGCTTCA CCGTGCGCCT GCCCAGGGGG
CATGCGCATC TTCCGGCCGA GCACCGGCCC GCGCGCCCGC CTGCCGCGCA CCCGCAGGTG
GATGAGGCCC TGCGCTGGCT GCCGGGCGAG CCCGCCCCGG CTGCCAGCGA CGAAGCCAGG
CCCATGCAGC AGGACATGCA CGGTGGTGCC CTACCCCCGC GTGCCCGCAT CGTCTGCGCC
GATGACAACG CCGACATGCG CAGCTACATC GGCCAGTTGC TGGAGCCGCT GTATGAAGTG
GAGATCGTGG GCGATGGCCG CGCCGCGCTG GCCAGCATCC ACCGCCAGCG GCCCGACCTG
GTGCTGGCCG ACGTGATGAT GCCCGTGCTC GACGGCTTCG AGCTGCTGCA TGCGCTGCGC
AGTGACGAGA CCACGCGCGC CATTCCCGTC ATCATGCTGT CCGCGCGGGC CGGCCAGGAG
GCCCAGGTCG AAGGCCTGCG CGCGGGCGCG GACGACTACC TGGTCAAGCC CTTTTCGGCG
CGCGAGCTGC TGGCGCGCAT CGCATCGCTG CTGCAGCTGG TGAGTGTGCG CGAACAGGCC
CACGCCGCCG TTCAGGCCAA CGAGAAAAAG CTGCGCGCCA TCATCGACCA GATGCCCGCG
GGCGTGGGCG TCTCCGACAT GAGCGGCACC ATGGTATTGA GCAATGCGAT CATGGACCGC
TTCGTGCCGC GCGCCATTCC TTCCACCCTG GCGGACCGCA TGCCGCGCTG GAAGGGATGG
GATGACAAGG GCCAGCCCAT TGCCCCCGAG AACTGGCCAG GCAAGCGCGC GCTGCGCGGC
GAAGTGGTCA TGCCGGGGCT GGAGATGCTG CACACCGACG ACGATGGGCG CGAATGGTGG
ATGCGCGTCA GCTGCGCGCC GCTGCGCGAT GACGACGGCC AGCTCATAGG CACCTGCTCC
GTCATCCAGG ACATCACCGA ACTCAAACAG GCCGAGCACC ACCTCAAGGA AGCCGACCGA
CGCAAGGACG AATTCCTGGC CACGCTGGCG CATGAGCTGC GCAATCCGCT GGCGCCCATC
AGCCACGGCC TGCAAATCCT CAAGCGCACC GCCAGCGGCG ACGACAGCGT GCGCCACAGC
CACGAGATGC TGGAGCGCCA GGTCAACCAC ATGATCCGCA TGGTGGACGA CTTGCTGGAG
GTCTCGCGCA TCACCACGGG CAAGGTCCAG TTGCGCAAGG AACTGGTGGA CCTGAACGAT
GTGCTGCAAG GCGTGGTGGC GGCCAGCGGC GCGGTCATGG AGGCAGGCAG CCACCAGTTG
CGCCTGGAGC TGCCCGCCGC GCCCGTGTCG CTGCTGGCCG ACCCGATGCG GCTGGCGCAG
ATGGTCTCCA ACCTGCTCAA CAATGCCGCC AAGTACTCGC ACTCCGGCGG CCACATCGTT
CTGGCCGCCT GGACCGATGG CGCGCAGGCC GTGGTCTCGG TACGCGACAA CGGCATCGGC
ATCCCGCCCG CCCTGCTGGG CAAGGTGTTC GATCTGTTCA TGCAGGTGGA CCGCAACGGC
CGCCGCGGGC AGGGCGGCCT GGGCATCGGG CTGACCCTGG TGCGCAGCCT GGTCGAGATG
CACGGCGGCA GCGTGCAGGC GCTCAGCGAA GGCAAGGGCC AGGGCAGCGA ATTCAGGCTG
TACCTGCCCC TGCCCACCCA GGCGGAGCCC CCGGCGGGAC AGGCACCGAA TGCCCAGCCC
GAGGATGCAA CGGCCTTCGG CCGCATCCTG GTGGTCGATG ACAACATCGA CGCCGCCGAC
ACCCTGGCCA TGCTGCTCAG GCTGCTGGGC GCCGAAGTCG AGATTGCCCG CGACGGCCCC
GGAGCCCTGG CCATGCACGC GGCGTTCAGG CCCGAAGTGG TGCTGCTGGA CATCGGCCTG
CCCGGCATGG ACGGCCTGGA GGTCGCCCGC CGCATCCGTG CAGAGCACGG CCGCGACCAG
GTCGTGCTGA TCGCGCTCAC GGGCTGGGGG CAGGAGGAGG ACCTGAGACG ATCGCGGGAA
GCCGGCATGG ATCACCACCT GGTCAAACCC GTGAGCTTCG ACACGCTCGA GCGTCTGCTG
GCGGGCCTGC GCCCCCTGCC GTGA
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| Protein sequence | MNSEDSFRFL PQRGEMPARV RSHDWAATPL GSPDGWPQNL RNAVSLALGS RFPITIWWGE
DFRLIYNDGY IPFLGTSKHP QALGQAGAHC WSEIWSDIGP MLEGVMRTGE ATWSTDARYF
FDRDLPQEEV FVTFTYGPIL ADDGVTVQGV FCPCTETTEK IVSRRRLETL HRLGIRTLDM
HNARDAAQKV CAVLDENPYD VPFAIIYECV DTPAAGSAGD SGPAFRMLCA TGMDLDMDLA
ADPSRWPLDR AVQSDPSDRA DLTDQAHQAA QPGQPVNVEL ASLGLFLPGG PWPEASRLAR
IVPVRWSGDG QVSGVMVLGV SPRRPLDVDY CAFLDMVASH TGSVVAHAQA YEQEARRAKA
LAEVDHAKTV FFSNISHELR TPLTLILGPL EDALREHGGQ VPAGQTQMIH RNALRLQKLV
NALLDFSRIE AGRMQASYEP TDLARTTAEL ASMFRSAVEQ AGLRLRVDCP PLDGPVHVDR
DMYEKIVLNL LSNAFKFTLQ GEIAVALRDV PDVHDAHGAG GANGAVELSV TDTGSGIAPQ
HLPHLFQRFH RIPGKPARTH EGTGIGLAMV QELARLHGGT VTVSSTEGEG SRFTVRLPRG
HAHLPAEHRP ARPPAAHPQV DEALRWLPGE PAPAASDEAR PMQQDMHGGA LPPRARIVCA
DDNADMRSYI GQLLEPLYEV EIVGDGRAAL ASIHRQRPDL VLADVMMPVL DGFELLHALR
SDETTRAIPV IMLSARAGQE AQVEGLRAGA DDYLVKPFSA RELLARIASL LQLVSVREQA
HAAVQANEKK LRAIIDQMPA GVGVSDMSGT MVLSNAIMDR FVPRAIPSTL ADRMPRWKGW
DDKGQPIAPE NWPGKRALRG EVVMPGLEML HTDDDGREWW MRVSCAPLRD DDGQLIGTCS
VIQDITELKQ AEHHLKEADR RKDEFLATLA HELRNPLAPI SHGLQILKRT ASGDDSVRHS
HEMLERQVNH MIRMVDDLLE VSRITTGKVQ LRKELVDLND VLQGVVAASG AVMEAGSHQL
RLELPAAPVS LLADPMRLAQ MVSNLLNNAA KYSHSGGHIV LAAWTDGAQA VVSVRDNGIG
IPPALLGKVF DLFMQVDRNG RRGQGGLGIG LTLVRSLVEM HGGSVQALSE GKGQGSEFRL
YLPLPTQAEP PAGQAPNAQP EDATAFGRIL VVDDNIDAAD TLAMLLRLLG AEVEIARDGP
GALAMHAAFR PEVVLLDIGL PGMDGLEVAR RIRAEHGRDQ VVLIALTGWG QEEDLRRSRE
AGMDHHLVKP VSFDTLERLL AGLRPLP
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