Gene Daci_4311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4311 
Symbol 
ID5749899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4716293 
End bp4717264 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content67% 
IMG OID641299414 
Producthypothetical protein 
Protein accessionYP_001565327 
Protein GI160899745 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACT TGTCTTGGGC GCCCCTGGGC GCGCTGGCCC TGGCAATTTC CGCCATTGCG 
GGCGGCGCCC ACGCCGCTGA CGAGAAGTCG GTCGCAGTGA CCGCCATCGT CGAGCACCCT
GCACTCGACG CCGTGCGCGA CGGCGTGCAG GCCGCGCTCA AGGAAGCAGG CTACGAAGCC
GGCAAGAACC TCAAGTGGCA GTACCAGAGT GCCCAGGGCA ACACCGGCAC GGCCGCGCAG
ATCGCACGCA AGTTCGTGGG CGACAAGCCT GACGCCATCG TGGCCATCGC CACGCCCTCG
GCCCAGGCCG TGGTCGCATC GACCAAGACC GTGCCCGTGG TGTTCTCCGC CGTGACCGAC
CCCGTGGCCG CCAAGCTGGT GCCCAGCTGG GAGCCGTCCA AGAACAACGT GACCGGCGTG
TCCGACCTGC TGGCCCTGGA CAAGCAGATG GATCTGGTCA AGCAGGTCGT GCCTAACGCC
AAGCGCGTGG GCATGGTCTA CAACCCCGGC GAGGCCAACT CCGCCGTGGT GGTCAAGGAA
CTCAAGGCCC TGCTGCCCAA GCTGGGCATG ACCCTGGTGG AAGCCGCCGC ACCCCGTTCC
GTGGACGTCA GCAGCGCCGC GCGCAGCCTG GTCGGCAAGG TCGACGTGAT CTATACCAAC
ACCGACAACA ACGTGGTCTC GGCCTACGAG TCGCTGGTCA AGGTCGGCCA GGACGCCAAG
ATCCCGCTGG TGGCCTCGGA CACCGACTCC GTCAAGCGCG GCGCCGTGGC TGCCCTGGGC
ATCAACTACC GCGATCTGGG CGAGCAGACC GGCCGCATGG TGGTGCGCAT CCTCAAGGGC
GAAAAGCCCG GCGACATGAA GACCGAAGTC AGCACCAAGA TGGAGCTGTT CGTGAATCCC
GGCGCCGCCG AGAAGCAAGG CGTCAAGCTG TCCGACGCGC TGGTCAAGTC GGCCGCCCAG
GTGATCAAGT AA
 
Protein sequence
MKHLSWAPLG ALALAISAIA GGAHAADEKS VAVTAIVEHP ALDAVRDGVQ AALKEAGYEA 
GKNLKWQYQS AQGNTGTAAQ IARKFVGDKP DAIVAIATPS AQAVVASTKT VPVVFSAVTD
PVAAKLVPSW EPSKNNVTGV SDLLALDKQM DLVKQVVPNA KRVGMVYNPG EANSAVVVKE
LKALLPKLGM TLVEAAAPRS VDVSSAARSL VGKVDVIYTN TDNNVVSAYE SLVKVGQDAK
IPLVASDTDS VKRGAVAALG INYRDLGEQT GRMVVRILKG EKPGDMKTEV STKMELFVNP
GAAEKQGVKL SDALVKSAAQ VIK