Gene Daci_4309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4309 
Symbol 
ID5749897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4713533 
End bp4714003 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content62% 
IMG OID641299412 
Productthioesterase superfamily protein 
Protein accessionYP_001565325 
Protein GI160899743 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.515868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGGTGGC GCTACAACAA GGAGACTGCA GGCATGCGCA TAGAGATTCC AGAATATAAA 
AAATGGGTTC ACGAGATGCG ATTCAAAGTG CGCTGGGGCG ACATGGACGC CATGGGCCAT
GTCAACAACG CCATGTACTT CCGCTATCTG GAGACTGCCC GCATCGACTG GATGGTCGAA
GCGGGCATGG CGCCTACGCC GGGCGGGCAG GGGCCGGTCA TCGTCAATGC GTTCTGCAAC
TTCCACCAGC AGCTGGCCTA TCCCGACGAG GTGCTGCTCA AGATGTACGT CAGCGACCCC
GGCCGCACCA CCTTCGAGAC CTGGGGAACC ATGGAACGCG TTTCCGAGCC CGGCGTCATC
TGCGCCGCCG GCGGCGGCAC CGTGATCTGG GTGGACTTTC CCAGGCAGAA GGCCATCGAG
TTGCCGGACT GGGTGCGGGA GATGGTGGGC GCAGGCACCA GTCCCGGCTG A
 
Protein sequence
MRWRYNKETA GMRIEIPEYK KWVHEMRFKV RWGDMDAMGH VNNAMYFRYL ETARIDWMVE 
AGMAPTPGGQ GPVIVNAFCN FHQQLAYPDE VLLKMYVSDP GRTTFETWGT MERVSEPGVI
CAAGGGTVIW VDFPRQKAIE LPDWVREMVG AGTSPG