Gene Daci_4306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4306 
Symbol 
ID5749894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4710157 
End bp4711083 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content63% 
IMG OID641299409 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001565322 
Protein GI160899740 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.244764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCA TTTTGGGCGC CAATGGCCAG ATCGCGGTGG AGCTGGCGCG CGAGCTCCAC 
CGCAACTACA CGCAGAACCT GCGCCTGGTC AGCCGCAAGC CGCGCAAGGT GAACGATACG
GACGAGCTGG TGTCCGCCGA CCTGACGAAT TCCGCGCAAA CCCTGGAGGC CGTACGTGGC
AGCGAGGTCG TGTACTTCAC CGCCGGCCTG CCACCAGACA CCGAATTATG GGAAAGGCAA
TTTCCTGCCA TGCTGCGCAA CGCACTTGAT GCCACGCGGG CAGCGGGTGC CAAATTTGTC
TACTTCGACA ACACCTACAT GTACCCGCAA ACCGCGCAGC GGCAGACCGA GGAAACCGCC
TTTGCCCCGG TGGGCCGCAA GGGGCGCGTG CGCGCCTTGA TGGCCGAGAT GGTGCTGGCC
GAGATGCAGC GCGGCGATAT CCCCGTCGCC ATTGCCCGCG CGCCGGAGTT CTACGGCCCC
GGCAAAACCC AAAGCATCAC CAACACCCTG GTGATCGGCC CGCTCAAGGC GGGCCAGAAG
GCCAAAGTGC CGGTCCGTGA CGACAAGCTG CGCACCCTGA TCTGGACGCC CGATGCAAGC
CGCGCCATGG CAGCCATCGG CAATGCGCAA GATGCGTATG GCCAGACCTG GCATCTGCCT
TGCTGGGACG AGCGGCTGAC CTATCAGGCC TTTGTGAACC TGGCGGCTGC AACCTTTGGG
GTTGAGCCGC GCTACAAGGT ACTGAGCCAC CTGGCCATGG TGGCTGCTGG CTGGGTCTCC
AAGCCCGTGC GCGAACTGCG TGAACTGCTG CCACGCTACG CACACGACAA TGTGTTTGAT
TCGTCCAAGT TCAAGCGCCG CTTTCCCGAC TTTGCTGTCA CCAGCTACGC ACAGGGCCTC
AAGCACATCG CGCAGGAGTC TTCATGA
 
Protein sequence
MQTILGANGQ IAVELARELH RNYTQNLRLV SRKPRKVNDT DELVSADLTN SAQTLEAVRG 
SEVVYFTAGL PPDTELWERQ FPAMLRNALD ATRAAGAKFV YFDNTYMYPQ TAQRQTEETA
FAPVGRKGRV RALMAEMVLA EMQRGDIPVA IARAPEFYGP GKTQSITNTL VIGPLKAGQK
AKVPVRDDKL RTLIWTPDAS RAMAAIGNAQ DAYGQTWHLP CWDERLTYQA FVNLAAATFG
VEPRYKVLSH LAMVAAGWVS KPVRELRELL PRYAHDNVFD SSKFKRRFPD FAVTSYAQGL
KHIAQESS