Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4306 |
Symbol | |
ID | 5749894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4710157 |
End bp | 4711083 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641299409 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001565322 |
Protein GI | 160899740 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.244764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACCA TTTTGGGCGC CAATGGCCAG ATCGCGGTGG AGCTGGCGCG CGAGCTCCAC CGCAACTACA CGCAGAACCT GCGCCTGGTC AGCCGCAAGC CGCGCAAGGT GAACGATACG GACGAGCTGG TGTCCGCCGA CCTGACGAAT TCCGCGCAAA CCCTGGAGGC CGTACGTGGC AGCGAGGTCG TGTACTTCAC CGCCGGCCTG CCACCAGACA CCGAATTATG GGAAAGGCAA TTTCCTGCCA TGCTGCGCAA CGCACTTGAT GCCACGCGGG CAGCGGGTGC CAAATTTGTC TACTTCGACA ACACCTACAT GTACCCGCAA ACCGCGCAGC GGCAGACCGA GGAAACCGCC TTTGCCCCGG TGGGCCGCAA GGGGCGCGTG CGCGCCTTGA TGGCCGAGAT GGTGCTGGCC GAGATGCAGC GCGGCGATAT CCCCGTCGCC ATTGCCCGCG CGCCGGAGTT CTACGGCCCC GGCAAAACCC AAAGCATCAC CAACACCCTG GTGATCGGCC CGCTCAAGGC GGGCCAGAAG GCCAAAGTGC CGGTCCGTGA CGACAAGCTG CGCACCCTGA TCTGGACGCC CGATGCAAGC CGCGCCATGG CAGCCATCGG CAATGCGCAA GATGCGTATG GCCAGACCTG GCATCTGCCT TGCTGGGACG AGCGGCTGAC CTATCAGGCC TTTGTGAACC TGGCGGCTGC AACCTTTGGG GTTGAGCCGC GCTACAAGGT ACTGAGCCAC CTGGCCATGG TGGCTGCTGG CTGGGTCTCC AAGCCCGTGC GCGAACTGCG TGAACTGCTG CCACGCTACG CACACGACAA TGTGTTTGAT TCGTCCAAGT TCAAGCGCCG CTTTCCCGAC TTTGCTGTCA CCAGCTACGC ACAGGGCCTC AAGCACATCG CGCAGGAGTC TTCATGA
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Protein sequence | MQTILGANGQ IAVELARELH RNYTQNLRLV SRKPRKVNDT DELVSADLTN SAQTLEAVRG SEVVYFTAGL PPDTELWERQ FPAMLRNALD ATRAAGAKFV YFDNTYMYPQ TAQRQTEETA FAPVGRKGRV RALMAEMVLA EMQRGDIPVA IARAPEFYGP GKTQSITNTL VIGPLKAGQK AKVPVRDDKL RTLIWTPDAS RAMAAIGNAQ DAYGQTWHLP CWDERLTYQA FVNLAAATFG VEPRYKVLSH LAMVAAGWVS KPVRELRELL PRYAHDNVFD SSKFKRRFPD FAVTSYAQGL KHIAQESS
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