Gene Daci_4301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4301 
Symbol 
ID5749889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4706215 
End bp4707234 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content70% 
IMG OID641299404 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001565317 
Protein GI160899735 
COG category[R] General function prediction only 
COG ID[COG3380] Predicted NAD/FAD-dependent oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGTC TGGCATGTGC ACAGCTGCTG GCCGAGGCTG GCTGCCGCGT GGATATCTTC 
GAGAAAAGCC GAGGCCCATC GGGGCGCATG AGCACACGGC GCGCGCAGGA TCCGCAGGGT
GCGTGGCAGT GCGATCACGG CGCTCCATCG TTTGCGGCCC AGGACCCGGA GTTTGTGCAG
GAGGTGCGCC AGTGGGAGCA GCACGGCGTT GTCGCCGCCT GGCGTCCGCG CGCAGTGCGC
CTGCAGGGCA AAGACGTGGT GCCAGCAGAT GCGGGCCCCG ACCGCTGGGT GGGCGTGCCG
CGCATGACCT CTCCCGCAGC GTTTCTTGTC CAGCGGCTTG CACAACAGGG GCATGGCGCA
CGGCTGCACC TGCAAGCCAC GGTTCAGCAG TTGCAGTACG AATCTGCCTG CTGGACTGTG
CACTGTGCCG AACACGGGCA GATCGGATCG GAATACTGCG CCCTGGTGCT GGCAGTGCCT
GCACCGCAGG CGGCAGCCTT GCTGGGGCCG GTCTCGCCCT ATGCGTCGGC ACTGGCTGCC
AGCGCGCGCA TGCAGCCTTG CTGGGTGGCC ATGCTGCGCA CCGACGCCCC CCTGCCGCTG
GACTGGGATG CGGCAGAAAT CACGGATGGC CCGCTGTGCT GGGTGGCAAG CGACAGCGCC
AAGCCAGGGC GACAGGGGCC GCAAGTGCCG CAAGGACCTC AGACCTGGGT GCTGCATGCC
AGTGCACGGT GGAGCCAGGA TCACATCGAA TCGGACGCCG AATCCGTGGC CCGGCAACTG
CTGCAGGCAT TCGAGGCCCT GGCCAGCTCT CTGACCGGCT CTCTGCCAGG CGGCCTGCGC
GTCACTGCCC ACCGCTGGCG CTATGCGCTG CCGGCGCCGC ACCTGGTCAA CCGCTGCTGG
TGGGACGCGC CTGCGGGCCT GGGCCTGTGC GGCGACTGGA TGTGCGGCGC AGGCGTCGAA
GGCGCCTGGC TCAGCGGACG GGCGCTGGCC CGGCGTGCCC TGGCCACGCT GACGCGCTGA
 
Protein sequence
MAGLACAQLL AEAGCRVDIF EKSRGPSGRM STRRAQDPQG AWQCDHGAPS FAAQDPEFVQ 
EVRQWEQHGV VAAWRPRAVR LQGKDVVPAD AGPDRWVGVP RMTSPAAFLV QRLAQQGHGA
RLHLQATVQQ LQYESACWTV HCAEHGQIGS EYCALVLAVP APQAAALLGP VSPYASALAA
SARMQPCWVA MLRTDAPLPL DWDAAEITDG PLCWVASDSA KPGRQGPQVP QGPQTWVLHA
SARWSQDHIE SDAESVARQL LQAFEALASS LTGSLPGGLR VTAHRWRYAL PAPHLVNRCW
WDAPAGLGLC GDWMCGAGVE GAWLSGRALA RRALATLTR