Gene Daci_4234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4234 
Symbol 
ID5749822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4632814 
End bp4633317 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content68% 
IMG OID641299337 
Productferric uptake regulator family protein 
Protein accessionYP_001565250 
Protein GI160899668 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0343972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.519768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCA GCAAGATGCC CCTGAGCCCG GGCGGCGAAC CCGAACTGCG CAGCGTCGGC 
CTGAAGGCCA CGCTGCCGCG CATGCAGGTG CTGGAAATCT TCAGGCAGAG CGCATCGCGC
CACCTGCATG CCGAGGACGT GTTCCGCCTG CTGGCCGAGC GGCGCGCCGA GGTGGGCCTG
GCCACCGTCT ACCGCGTGCT GTCGCAGCTG GAGGCCGCAG GCCTGCTGCT GCGCCAGACC
TTTGAAAGCG GCAAGGCGGT GTTCGAGCTC AACGAGGGGC CGCACCATGA CCACCTGATC
TGCCTGCAGT GCGGACGCGT GGATGAATTC AGCAACGACC ACATCGAGGC GCTGCAGCAC
CAGGTGGCCC AGGCCCACGG CTACCGCCTG GCCGACCACC GCCTGGCCCT GTACGGCCAT
TGCGGCGCGT GCTCGCAGCT GCCACCCGAA TCACCGGCAC AGCCCGTGCA GGCAAGACAG
CCTGCGCTGC AGGACAACGA ATGA
 
Protein sequence
MTRSKMPLSP GGEPELRSVG LKATLPRMQV LEIFRQSASR HLHAEDVFRL LAERRAEVGL 
ATVYRVLSQL EAAGLLLRQT FESGKAVFEL NEGPHHDHLI CLQCGRVDEF SNDHIEALQH
QVAQAHGYRL ADHRLALYGH CGACSQLPPE SPAQPVQARQ PALQDNE