Gene Daci_4222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4222 
Symbol 
ID5749810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4623548 
End bp4624375 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content70% 
IMG OID641299325 
Producthypothetical protein 
Protein accessionYP_001565238 
Protein GI160899656 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.333624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.192087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCA CCACCGAACA AAAGCGCGCC ACCTTCCACG CCCTGCACCG CCAGGGCTGC 
TTTGTGCTGC CCAACCCCTG GGATGCGGGC AGCGCCCGCA TGCTGCAGGG CCTGGGCTTC
AAGGCGCTGG CCAGCACCAG CTCGGGCCAT GCCTGGTCGC TGGGCCAGCC CGATGGCGCC
ATCTCCCGCG AGATGACGCT GGAGCATCTG CGCAGCCTGG TCGCGGCCAC CGATCTGCCC
GTAAATGCGG ACTTTGAGAG CGGCTTCGGC CTGGGCCCGC AGGAGGTCGC CGAAAGCGTG
CGCATGGCCG TGGACACCGG CGTGGCGGGC CTGTCCATCG AAGACTCGTC GGGCGATGCA
GCCAACCCCT TGCGCAGCAT CGAGGAAGCC GTGGCCCGGC TGCGCGCCGC CCGTGCCGCC
ATCGACGAGG CCGGTGGCGG CACCTTGCTG GTCGGGCGTG CGGAGAATTT CTTCGTGGGC
CGGCCCGATC TGGACGACAC CATTGCCCGG CTCAAGGCCT ATGCCGAGGC CGGCGCGGAC
TGCCTGTACG CACCCGGCAT CCGGAGCGCC GAGCAGATCC GTGCCGTGGT GGCGGCCGTG
GCACCCAAGC CGGTGAATCT GCTGATCGGC GGGGCCAGCG AATGGAGCCT GCAGGATGCC
CAGGCCATGG GCGTGCGCCG CATCAGCGTG GGCGGCGCAC TGGCGCGCGC AGCCTGGGGC
GGCTTTCTGC ATGCGGCGCG CTCCATTGCC GAGACGGGGC GCTTCGACGC GTTCGCCCAG
GCCACGCCGG GCGCCGAACT CAATAGGTTT TTTCAGGGCA AGGACTGA
 
Protein sequence
MTPTTEQKRA TFHALHRQGC FVLPNPWDAG SARMLQGLGF KALASTSSGH AWSLGQPDGA 
ISREMTLEHL RSLVAATDLP VNADFESGFG LGPQEVAESV RMAVDTGVAG LSIEDSSGDA
ANPLRSIEEA VARLRAARAA IDEAGGGTLL VGRAENFFVG RPDLDDTIAR LKAYAEAGAD
CLYAPGIRSA EQIRAVVAAV APKPVNLLIG GASEWSLQDA QAMGVRRISV GGALARAAWG
GFLHAARSIA ETGRFDAFAQ ATPGAELNRF FQGKD