Gene Daci_4048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4048 
Symbol 
ID5749635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4454603 
End bp4455826 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content70% 
IMG OID641299150 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001565064 
Protein GI160899482 
COG category[R] General function prediction only 
COG ID[COG3380] Predicted NAD/FAD-dependent oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0468618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTACAG GTCCCGGCCT GCTCCGCCGC TGCGGCGAAG CAGGCCGGCA AGGACATGCT 
TCCCGGAATC TGCCACTGCC CGCAAAGGTC TGCTCCATGA ACGCTTCCCG CGCCGCCTCC
AAGTCCACGG TCAAGAAAAA GGCCACCAAG CCCCCCGAAG CCTCCAAGGC GCGCCCCAAG
GCCGGCGCGC GCCGCATTGC CGTGATTGGC GCCGGCATGG CGGGCCTGGC CTGCGCCCGC
ACGCTGATGC AGGCCGGCCA CGATGTCCAT GTCTACGAAC GGCTGCCCCA GGTGGGCGGG
CGCATGCGCT CCGTCAACGC CGCGCATGGC GCCTTCGACA TCGGCGCGCA GTATTTCACC
GTGCGCGACA AGCGCTTCGA GCTGGCCCTG CAGACCGTGC CCGGCCTGTG CCGCCCCTGG
AGCGTGAGCA CGCTGCGCGT GCTGGATGCG CAGGGCCGCC AGTCCAGCGC TGCACCCGCA
CCCACCGAAG CCCATTGGGT AGCCACGCCC GACATGCAGG CCCTGCCGCT GGCCTGGGCC
GCGCCGCTGT GGGATGCCGA CCGCCTGCAC CTGGGCCAGC GCGTGACCAG GCTCGAACGC
CAGCCCGGCC CGCGCGGCTG GAGCCTGCAT GTGGAGACGA CCGAGCCGAC CACGCAGATC
CGCACGGGAT TCGATGAAGT GATACTCGCC CTGCCCGCCC CACAGGCGCG CCAGCTGCTG
CAGACCACGC CCCTGGCCCT GTCGCTGGTG CAGGGCATGG CGGCCGTGGA AATGGCGCCC
TGCTGGGCGC TGACGCTGTC CTACCCCATG GCCACCGAGG CCGGACTGTC CACCCTGGGG
CCGCAGTGGA ATGCGGCCCG CACCACGCAT GAGCGCGCAG TCTGGGTGGC ACGAGAATCC
TCCAAGCCGG GCCGCTCCCA AAGCGAACGC TGGACCGTGC TGGCCAGTCC CCAATGGTCG
CAGGAGCACC GTGCCGACGA CGCCCCGCGC GTGCTGGCCA AGATGCAGAA GGCGTTTGGC
GAGATCACGC GCATCCGCAT CCCTCCCCGC CATGCCAGCG TCTACCTCTG GCCCCATGCG
CAGACCCTGT CGCCGCTGGG CCGCAGCCAT TTGCGCAACA AGGATGCGGG CCTGGGCCTG
TGCGGCGACT GGTGCATTGG CCGCCGCGTG GAGGATGCCT TTGTCTCGGG ACTGGAAATG
GCCCTGGCGT TGGTTGCGGG CTGA
 
Protein sequence
MVTGPGLLRR CGEAGRQGHA SRNLPLPAKV CSMNASRAAS KSTVKKKATK PPEASKARPK 
AGARRIAVIG AGMAGLACAR TLMQAGHDVH VYERLPQVGG RMRSVNAAHG AFDIGAQYFT
VRDKRFELAL QTVPGLCRPW SVSTLRVLDA QGRQSSAAPA PTEAHWVATP DMQALPLAWA
APLWDADRLH LGQRVTRLER QPGPRGWSLH VETTEPTTQI RTGFDEVILA LPAPQARQLL
QTTPLALSLV QGMAAVEMAP CWALTLSYPM ATEAGLSTLG PQWNAARTTH ERAVWVARES
SKPGRSQSER WTVLASPQWS QEHRADDAPR VLAKMQKAFG EITRIRIPPR HASVYLWPHA
QTLSPLGRSH LRNKDAGLGL CGDWCIGRRV EDAFVSGLEM ALALVAG