| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4041 |
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| Symbol | |
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| ID | 5749628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4449066 |
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| End bp | 4449914 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641299143 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001565057 |
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| Protein GI | 160899475 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0649407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCGC GGCGACAATC GAGCCTACAC ACTGATACAC TTCACTGGCT TTTCATTCAG
CCCTCCGTGA CTGCCCCCGC ATCCCACCAA TCCGTATACC TGCGCGACCT GCGCCTGGCC
ACAGCCCACG CGCTGGTTAC CCACGCTGGT GGGGCGGTCC ATCTGCCCAC GGATTCGCCG
ACGCGATATC TGCAGGCGCT GATCGATGAA CTGTGCTCGC TGTCGCTGCG CGACCCGCTC
ACGGGGCTGG CCAACCGCCG CCATTTCCGC ACCATTGCCG AGCGCGAGAT CGACCGCGTG
GCGCGGTCTG GCGAAGCGGC CCTGATGCTG ATGCTGGACA TCGACCATTT CAAGCAGATC
AACGACCAGC ACGGCCATAT CGTGGGCGAC CGGGTTCTGC AGTCGGTGGC CCGTACCCTG
ACCAATTGCG TGCGCCCCAT GGACACGCTG GCCCGCTACG GAGGAGAGGA ATTCGCCATC
GTGCTGCCCG CCTGCCCTGC GACCTTCGGT CTCTCCGTGG CCGAACGCAT ACGCAGCGCC
ATCGAGCGCA TGCCGGTCGT CATCTCACCC ACGCTGACGC TGCAGATCAC CATCAGCATC
GGCGGCGCCT ATGCGCTGCA GTGGATACGC AGCACCACAA CCTTGTGGAC CGAGCGTGCC
GACAAACAGT TGTACCTGGC CAAATCCGCC GGCCGCAACC GCGTGCACAT TGAAGAACAA
CCTGACAGTA CGGTAAGCGC GGAGGAAAAA AGCCTGCTTT TCGGACCTTT GTATGCCCCG
TCCCCGTTTG ACAATGGGCT GAATCCAGAT ATTGCAACCG ATGTGGACCC CGAAGATGGA
CTCCGCTGA
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| Protein sequence | MPARRQSSLH TDTLHWLFIQ PSVTAPASHQ SVYLRDLRLA TAHALVTHAG GAVHLPTDSP
TRYLQALIDE LCSLSLRDPL TGLANRRHFR TIAEREIDRV ARSGEAALML MLDIDHFKQI
NDQHGHIVGD RVLQSVARTL TNCVRPMDTL ARYGGEEFAI VLPACPATFG LSVAERIRSA
IERMPVVISP TLTLQITISI GGAYALQWIR STTTLWTERA DKQLYLAKSA GRNRVHIEEQ
PDSTVSAEEK SLLFGPLYAP SPFDNGLNPD IATDVDPEDG LR
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