Gene Daci_4028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4028 
Symbol 
ID5749615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4436918 
End bp4437340 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content64% 
IMG OID641299130 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_001565044 
Protein GI160899462 
COG category[S] Function unknown 
COG ID[COG2764] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0559791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.357373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTCA TCCCCTATCT GAACTTCAAC GGCAACTGCG CCGAGGCCTT TGCCTTCTAC 
GCCAGGCTGT TCGGCGGCAC CATCGTCCAC CAGAGCACCT TCGGCGAGAC TCCCGGCTTC
GAGCAGATGC CCGAGGCCGG CAAGAATCTG ATCATGCATG CCCACCTGCA GATCAAGGAC
CAGGCGCTGA TGGCCTCGGA CGCCACCGAC AACTGCGGTG GCGGCGGCTA CCAGCAGGCC
CAGGGCATGT GGATCTCGAT CGGCGTGGAC GACGCCACCG AAGGCGGCCG CATCTTCAAC
GCGCTGGCCG AAGGCGGCAA GGTGACCATG CCCTTCCAGG CCACGTTCTG GTCGCCGGGC
TTTGGCATGG TGACGGACCG CTTCAATACG CCCTGGATGG TCAACGTCAG GGGCGAGGCC
TGA
 
Protein sequence
MQFIPYLNFN GNCAEAFAFY ARLFGGTIVH QSTFGETPGF EQMPEAGKNL IMHAHLQIKD 
QALMASDATD NCGGGGYQQA QGMWISIGVD DATEGGRIFN ALAEGGKVTM PFQATFWSPG
FGMVTDRFNT PWMVNVRGEA