| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4019 |
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| Symbol | |
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| ID | 5749606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4427366 |
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| End bp | 4429186 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641299121 |
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| Product | ABC transporter |
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| Protein accession | YP_001565035 |
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| Protein GI | 160899453 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0431407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.349748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATGG ATTGGAGCAA GGCACTGCAG GACAGCCTGG CCTGGCTGGC CGTAGCCTCG
GCGATCACCG TCGTGGCGTT TGCGGCAGTT GCGGTGCTGT TGGTTCGCTT CACGCGCTGG
GGGCGGCAGT TCTGGCAACT GGCCGGACCC TTCCTGCATC CCCGCAACGG CTGGTGGCCG
ACACTGGTGT TCGCGCTGCT GCTGGTGCTC TCGCTGATCT CGGTGCGCAT GAACGTGCTG
TTCTCCTTTT GGTACAACGG CTTCTACAGC GCGCTGCAGG AGCTGGACCA GAAGGGCTTT
TGGCGATTCC TTGGCATCTT CGCGGTGCTG GCCACCATCC ATGTGATGCG CGAGCTGTTC
AACTACTACG TGAACCAGGC ATTCCGCATC CGCTGGCGGG TCTGGCTCAA TGAGCGCGTG
ACCACCGACT GGATGCGCGG CGACGCCTAC TACCGCAGCC ACTTCCTGGA CGAGCCGGTG
GACAACCCCG ACCAGCGCAT CGAGCTGGAT GTGAACACCT TTGTCTCGAA CTCGCTGACC
CTGGCGCTGG GTGCCGTCAG CGCCGTGGTC TCGCTGGTGG CGTTCACGGG CATTCTCTGG
GGGCTGTCCG CGCCCATTGC CGTGGCGGGC GTGGAGGTTC CGCGGGCCAT GGTCTTTGCG
GTCTACGTCT ACGTGATCAT CGCCACGCTG ATCGCCTTTC GCCTGGGCCA GCCGCTGATC
CGGCTGAACT TCCTGAACGA GAGGCTCACC GCCAACTTCC GCTACGCCCT GGTGCGCGTG
CGCGAATACG CGGAGAACAT CGCCTTCTAC CAGGGCGCGG CCATCGAACG CAACACGCTT
TTGACGCGCT TCTCGGCATT GATCGCCAAT GTCTGGGCCC TGGTCTACCG CAGCCTGAAG
TTCGACGGCT TCAACCTCAC CGTCAACCAG GTGGCCGTGG TCTTTCCCTT TCTGCTGCAG
GCGCCGCGCT TTTTCAGCGG TGCCATCAAG CTCGGTGATG TGATGCAGAC CTCGCAGGCC
TTTGGGCAGG TGCAGGATGC GCTGTCCTTC TTCCGAACCT CCTACGACAC CTTCGCCCAG
TACCGCGCTG CGCTGGACCG CCTGTGCGGC TTTCTGGATG CCAATGCCCA GACCCGCGAA
CTGCCCCAGG TCGTCCACAA AGAGCAACCC GGCGCCCTGG ACATCGAGGG TCTGCAGGTC
AGCCGCCCTG ATGGCCACCA TCTGCTCAGC GACCTGCAAC TGAAGCTCAT TCCCGGCCAG
GCGCTGCTGA TCAAGGGGCC TTCGGGCAGC GGCAAGACCA CCTTGCTGCG GTCCATTGCC
GGCCTGTGGC CGCACGCCGA AGGCACGGTG GGCCGCCCGG GCGGCCACCA GGCGCTGTTC
CTGTCCCAGC GTCCGTATCT GCCGCTGGGT GACCTGCGCA CGGCCATTGC CTATCCTGCC
GATGCCTCGC CGCAGGACGA TGAGCGACTG CAGCAGGCGC TGCGCCAGGT CAGCCTGGCC
CATCTGGCCG ACAAGCTGGA TGTCAACCAG GATTGGTCCC GCATCCTGTC GATTGGCGAG
CAGCAGCGCC TGGCCTTTGC CCGCGTGCTG TTCAACCGGC CGGCCATCGT CTTTCTCGAT
GAATCCACCT CGGCCATGGA CGAGGGCCTG GAGCATGCGC TGTACACCCT GCTGCGCGAG
CAGATGCGCT CGACCATGCT GGTGAGCGTG GGCCACCGCA GCACGCTGGC GGGTTTCCAT
ACCCACGCGC TGGCGGTCGA TGGCAATGGC GGCTGGACGC TGTCGGAAGG AAGCGCACCG
CAGAGCGCGC CCCAGGCTTG A
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| Protein sequence | MDMDWSKALQ DSLAWLAVAS AITVVAFAAV AVLLVRFTRW GRQFWQLAGP FLHPRNGWWP
TLVFALLLVL SLISVRMNVL FSFWYNGFYS ALQELDQKGF WRFLGIFAVL ATIHVMRELF
NYYVNQAFRI RWRVWLNERV TTDWMRGDAY YRSHFLDEPV DNPDQRIELD VNTFVSNSLT
LALGAVSAVV SLVAFTGILW GLSAPIAVAG VEVPRAMVFA VYVYVIIATL IAFRLGQPLI
RLNFLNERLT ANFRYALVRV REYAENIAFY QGAAIERNTL LTRFSALIAN VWALVYRSLK
FDGFNLTVNQ VAVVFPFLLQ APRFFSGAIK LGDVMQTSQA FGQVQDALSF FRTSYDTFAQ
YRAALDRLCG FLDANAQTRE LPQVVHKEQP GALDIEGLQV SRPDGHHLLS DLQLKLIPGQ
ALLIKGPSGS GKTTLLRSIA GLWPHAEGTV GRPGGHQALF LSQRPYLPLG DLRTAIAYPA
DASPQDDERL QQALRQVSLA HLADKLDVNQ DWSRILSIGE QQRLAFARVL FNRPAIVFLD
ESTSAMDEGL EHALYTLLRE QMRSTMLVSV GHRSTLAGFH THALAVDGNG GWTLSEGSAP
QSAPQA
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