Gene Daci_3997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3997 
Symbol 
ID5749584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4401500 
End bp4401823 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content62% 
IMG OID641299099 
Productiron-sulfur cluster assembly protein IscA 
Protein accessionYP_001565013 
Protein GI160899431 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR02011] iron-sulfur cluster assembly protein IscA 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0914293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0156155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCT CGCTGACCGA TTCTGCGGCA CGCCACGTGA GCCGCTACCT GTCGCGACGC 
GGCAAGGGCA TCGGCGTGCG CCTCGGGGTC AAGACCACGG GCTGCTCTGG CCTGGCCTAC
AAGCTGGAGT ATGTGGACGA GCAATTGCCC GAGGACGTGA TCTTCGAGGA CCACGGCATC
AAGGTGCTGG TCGATCCCAA GAGCCTGGCC TACATCGACG GCACGGAGCT GGATTTCGTG
CGTGAGGGCT TGAACGAAGG CTTCAAGTTT CACAACCCCA ACGAGCGTGA TCGCTGCGGT
TGCGGCGAGA GCTTTCGCAT CTGA
 
Protein sequence
MAISLTDSAA RHVSRYLSRR GKGIGVRLGV KTTGCSGLAY KLEYVDEQLP EDVIFEDHGI 
KVLVDPKSLA YIDGTELDFV REGLNEGFKF HNPNERDRCG CGESFRI