| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3980 |
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| Symbol | aceE |
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| ID | 5749563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4382194 |
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| End bp | 4384911 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641299078 |
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| Product | pyruvate dehydrogenase subunit E1 |
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| Protein accession | YP_001564996 |
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| Protein GI | 160899414 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0325061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00734706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACAGCTC AGACTGACCC GCAAGGCAAT GCAGGCGTTC CCGCCGGCCT GGACCAACAA
GAATCGCGCG AATGGATGGA CGCCCTGTCG GCCGTCATCG ACCGTGAAGG CGCCGAATAC
GCGCACAAGC TGATCGAGGA CCTGCTCGAA CACGCACGCC AGAACAGCGT GGACATGCCT
TTCTCGGCCA ACACCGGCTA TGTGAACACC ATCGAGACCT CGCAGGAAGC CCGCTGTCCC
GGCAACCTGG AAATCGAAGG CCGTCTGCGC GCCTACATGC GCTGGAATGC CATGGCCATG
GTGGTCAAGG CCAACCGCCT GCACCCGCCC GAAGGCGGTG ACCTGGGTGG CCACATCGGC
TCCTTCGCTT CGCTGGCCAA CATGTTCGCG GCCGGCTTCA ACCATTTCTG GCACGCCGAA
AACGAGAACC ACGGCGGCGA CTGCCTGTAT ATCCAGGGCC ACGTCTCGCC CGGCATCTAT
GCCCGCGCCT ACCTGGAAGG CCGCATCTCC GAGGAGCAGC TGCTGAACTT CCGCCAGGAA
GTGGACGGCA AGGGCCTGTC CAGCTACCCG CACCCCAAGC TGATGCCCGA GTTCTGGCAG
TTCCCCACGG TGTCCATGGG CCTGGGCCCG CTGATGGCCA TCTACCAGGC GCGCTTCCTC
AAGTACCTGC ATGCCCGTGG CATCGCCGAC ACCGAAAGCC GCAAGGTCTG GGTGTTCTGC
GGCGACGGCG AAATGGACGA GGTCGAGTCG CTGGGCGCGA TCTCGCTGGC CGCGCGCGAA
AAGCTGGACA ACCTGATCTT CGTGATCAAC TGCAACCTGC AGCGCCTGGA CGGCCCGGTG
CGCGGCAACG GCAAGATCAT CCAGGAACTC GAAGGCGAGT TCCGCGGCTC CGGCTGGAAC
GTCATCAAGC TGCTGTGGGG CAAGGGCTGG GACGAGCTGC TGGCCAAGGA CAAGGACGGC
GTGCTCAAGA AGATCATGGC CGAGTGCAAC GACGGCGACT ACCAGTCGTT CAAGGCCAAT
GACGGCGCCT ACGTGCGCAA GAACTTCTTC GGCCGCGATC CGCGCGCGCT GAAGATGGTC
GAGCACATGA GCGACGACGA GATCTGGAAC CTGCGCCGCG GCGGCCACGA TTCGCAGAAG
GTCTACGCTG CCTTCCATGC TGCCAATTCG CACAAGGGCC AGCCCACCGT GCTGCTGGTC
AAGACCGTCA AGGGCTTCGG CATGGGCAAG ATCGGTGAAG GCAAGAACAC CGTTCACCAG
ACCAAGAAGC TGGGCGACGA GGACATCAAG GCCTTCCGCG ACCGTTTCAA CATTCCCATT
CCCGACAGCC AGATCGCCGA CCTGCCTTTC TACAAGCCGG CCGACGACAC CCCGGAAATG
CGCTACCTGC ACGAGCGCCG CAAGGCCCTG GGCGGCTACC TGCCGCACCG CCGCGTGAAG
GCCAGCGAGC AATTCACGGC GCCTGCGCTT GATACCTTCA AGGCCATCCT CGAACCCACG
CCCGAAGGCC GTGAGATCTC GACCACCCAG GCCTATGTGC GCTTCCTCAC GCAGCTGCTG
CGCGACAAGG AAATCGGCCC GCGCGTCGTG CCCATCCTGG TGGACGAGGC CCGTACCTTC
GGCATGGAAG GCCTGTTCCG CCAGATCGGC ATCTACAACC CCGCTGGACA GCAGTACACC
CCGGTCGACA AGGACCAGGT GATGTACTAC CGCGAGGACA AGGCCGGCCA GATCCTGCAG
GAAGGCATCA ACGAAGCCGG CGGCATGAGC AGCTGGATCG CGGCAGCCAC GAGCTACAGC
ACGAGCAACC GGATCATGAT CCCGTTCTAC GTGTACTACT CGATGTTCGG CTTCCAGCGC
ATCGGTGACC TGGCCTGGGC GGCCGGCGAC ATGCAGGCGC GCGGTTTCCT GCTGGGCGGC
ACTTCGGGCC GCACCACGCT GAACGGCGAA GGCCTGCAGC ACGAAGACGG CCACAGCCAC
ATCCTGGCCA ACACCATTCC CAACTGCGTG AGCTACGACC CGACCTTCGC CCACGAAGTC
GCCGTGATCA TGCAGGACGG CCTGCGCCGC ATGGTGCAGA ACCAGGAAAA CGTCTTCTAC
TACATCACGC TGCTCAACGA GAACTACGCC ATGCCCGGCC TCACGCCCGG CACCGAGCAG
CAGATCATCA AGGGCATGTA CCTGTGCAAG CCCGGCCAGA AGGTGCCTGA AAGCGGCCTG
CGCGTGCAAC TGCTGGGTTC GGGCACCATC CTGCGCGAAT CCTTCTTCGC CCAGGAACTG
CTGCTGGCCG ACTGGGGCAT TGCCGCCGAC GTGTGGAGCT GCCCGAGCTT CAACGAGCTC
ACCCGCGACG GTCAGGAGGC CGACCGCTGG AACCTGCTGC ATCCGCTGGA CACCCAGAAG
GTGCCCTTCG TCACGCAGCA GCTGCAGTCG CACAATGGCC CGGTGATCGC ATCCACCGAC
TACATGAAGG CCTACGCCGA GCAGATCCGC CCCTACATGC CCAAGGGCCG CACCTACAAG
GTGCTGGGCA CCGACGGCTT CGGCCGCTCG GACTTCCGCC GCAAGCTGCG CGAGCACTTC
GAAGTGGATC GCCACTACAT CGTGGTTGCC GCACTGCGCG CGCTGGCCGA AGAAGGCAAG
ATCAACGCCA CCACCGTGGC CGAGGCGATC GCCAAGTACG GCATCAAGGC CGACAAGATC
AACCCGCTGC ACGCTTGA
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| Protein sequence | MTAQTDPQGN AGVPAGLDQQ ESREWMDALS AVIDREGAEY AHKLIEDLLE HARQNSVDMP
FSANTGYVNT IETSQEARCP GNLEIEGRLR AYMRWNAMAM VVKANRLHPP EGGDLGGHIG
SFASLANMFA AGFNHFWHAE NENHGGDCLY IQGHVSPGIY ARAYLEGRIS EEQLLNFRQE
VDGKGLSSYP HPKLMPEFWQ FPTVSMGLGP LMAIYQARFL KYLHARGIAD TESRKVWVFC
GDGEMDEVES LGAISLAARE KLDNLIFVIN CNLQRLDGPV RGNGKIIQEL EGEFRGSGWN
VIKLLWGKGW DELLAKDKDG VLKKIMAECN DGDYQSFKAN DGAYVRKNFF GRDPRALKMV
EHMSDDEIWN LRRGGHDSQK VYAAFHAANS HKGQPTVLLV KTVKGFGMGK IGEGKNTVHQ
TKKLGDEDIK AFRDRFNIPI PDSQIADLPF YKPADDTPEM RYLHERRKAL GGYLPHRRVK
ASEQFTAPAL DTFKAILEPT PEGREISTTQ AYVRFLTQLL RDKEIGPRVV PILVDEARTF
GMEGLFRQIG IYNPAGQQYT PVDKDQVMYY REDKAGQILQ EGINEAGGMS SWIAAATSYS
TSNRIMIPFY VYYSMFGFQR IGDLAWAAGD MQARGFLLGG TSGRTTLNGE GLQHEDGHSH
ILANTIPNCV SYDPTFAHEV AVIMQDGLRR MVQNQENVFY YITLLNENYA MPGLTPGTEQ
QIIKGMYLCK PGQKVPESGL RVQLLGSGTI LRESFFAQEL LLADWGIAAD VWSCPSFNEL
TRDGQEADRW NLLHPLDTQK VPFVTQQLQS HNGPVIASTD YMKAYAEQIR PYMPKGRTYK
VLGTDGFGRS DFRRKLREHF EVDRHYIVVA ALRALAEEGK INATTVAEAI AKYGIKADKI
NPLHA
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