| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3976 |
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| Symbol | |
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| ID | 5749559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4376869 |
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| End bp | 4377486 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641299074 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_001564992 |
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| Protein GI | 160899410 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0215233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGAAT GGATAGCTGT AGTCACCATT ACCTTGCTGG CCGTCATCAG CCCAGGGGCG
GATTTCGCCA TGGTCACACG CAACAGCCTG CTGCGCTCGC GCCGCGCGGG CCTGCTGACG
GCGCTGGGCA TTGGCCTGGG GGTGCTGGTC CATGTCGGCT ATACCTTGCT CGGGGTCGGA
CTGCTCATGC AGCAGTCCAC CTGGTTGTTC GACGTGGTCA AGCTGCTGGG TGCAGCCTAT
CTGATCTATC TGGGCGTGAC CATGCTGCGC AGCCGCCAGG AGGACGATTT GCCCAGCCAG
CCCGTGGCCG CGCTCTCCGA CATGGCGGCG CTGCGCACGG GCTTTCTGAC GAATGCGCTC
AATCCCAAGA CCACGGTGTT CGTGGTCAGC CTGTTCCTGC AGATCGTGGG ACAGGACACG
CCGCTGGCCA CGCAGCTGGC ATATGGCGGA TTCATCTCGC TGGCCCATGT GGCGTGGTTC
TGCATCGTGG CGCTGTGCTT TTCGGCCCAG CGGGTGCGTG CGCGGCTGCT GGCCGTGCGG
CATTGGATAG ACAGGGCCTT TGGCGGCATG TTGGTGGGGT TTGGTTTGCT GCTGGCAACG
GCCAAGCTGC GGCTGTGA
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| Protein sequence | MTEWIAVVTI TLLAVISPGA DFAMVTRNSL LRSRRAGLLT ALGIGLGVLV HVGYTLLGVG
LLMQQSTWLF DVVKLLGAAY LIYLGVTMLR SRQEDDLPSQ PVAALSDMAA LRTGFLTNAL
NPKTTVFVVS LFLQIVGQDT PLATQLAYGG FISLAHVAWF CIVALCFSAQ RVRARLLAVR
HWIDRAFGGM LVGFGLLLAT AKLRL
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