Gene Daci_3972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3972 
Symbol 
ID5749555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4372860 
End bp4373348 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content66% 
IMG OID641299070 
Producthypothetical protein 
Protein accessionYP_001564988 
Protein GI160899406 
COG category[S] Function unknown 
COG ID[COG2947] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.766671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0536087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCG CCCCCACCTC CGCCCGCCAG TTCTGGCTCA TGAAGAACGA GCCAGACGAA 
TTCTCCATAG ACCACGCGCT GGCCGCGCCG CAGGCCACCA TCGCCTGGGA CGGTGTGCGC
AACTACCAGG CGCGCAACTT CATGCGCGAT GCCATGCAGG TGGGCGATGG GGTGCTGTAT
TGGCACTCCA GTTGCGCCGA GCCCGGCATC TACGGTATCG CCCGCATTGC AGGCAACCTG
CGCGTCGATG CCTCGCAGTT CGACCCGCGC AGTCCCTACT ACGACCCCAA GTCCTCGCCC
GACAAGCCGC GCTGGCTCAC GCTGGACGTG CAGGCGCTGC GCAAGACACG CACGCTGCAG
ATCGCCGAGC TGCGCGAGCA TCCCGAGCTT GCCGGCATGC GCGTACTGCA AAAGGGCAAC
CGCCTGTCGA TCACGCCGGT CACGCCCAAG GAGTGGGCCT TCATCGAAGG CCTGCTCCAA
CCCGCCTGA
 
Protein sequence
MTAAPTSARQ FWLMKNEPDE FSIDHALAAP QATIAWDGVR NYQARNFMRD AMQVGDGVLY 
WHSSCAEPGI YGIARIAGNL RVDASQFDPR SPYYDPKSSP DKPRWLTLDV QALRKTRTLQ
IAELREHPEL AGMRVLQKGN RLSITPVTPK EWAFIEGLLQ PA