Gene Daci_3964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3964 
Symbol 
ID5749547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4364865 
End bp4366253 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content69% 
IMG OID641299062 
Productphosphomannomutase 
Protein accessionYP_001564980 
Protein GI160899398 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.234927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGTCG CATCTTCCAT CTTCAAAGCC TATGACATCC GCGGCATCGT GCCGTCCACG 
CTCAACGAGG AGGTCGCGCT TGGCGTGGGC CGCGCCTTCG GCATGGCGGC CCTGGCGGCT
GGCGAGACCG TGGTGGCCGT GGGACGCGAT GGCCGCCTGT CGGGACCCTC GCTGTCCGCG
GCGTTGATCG CCGGCCTGAC CGAGGTCGGC ATCGAGGTGA TCGACATCGG CCTGGCCACC
ACCCCCATGC TATACTACGC GGCCAGCACA CTGGCGCGCT CGGGCATCCA GGTCACGGGC
AGCCACAACC CCAAGGACTA CAACGGCTTC AAGATGGTGC TGGCCGGCCG CGCCATCTAC
GGCGAGGAAA TCCAGGCGCT GCGCCGCCGT GTCGAGAGCG ACGACTGGAC GATCACGGGC
ACCGGCAGCG TGCGCCGCGC CGATGTGCAG ACCGACTACC AGGCGCGCAT CGTGGGCGAC
GTGAAGCTGG CGCGCCCCAT CAAGATCGTG GTGGACTGCG GCAACGGCGT GGCCGGGGCC
TCGGCGCCCG GCATCTTCCG CGCCCTGGGC TGCGAGGTGA TCGAGCTGTT CTCCGAAGTG
GACGGTGAAT TCCCCAACCA CCATCCCGAT CCCAGCAAGC CCGAGAACCT GCGCGACGTG
ATCGAGGCGC TGCGCACCTC GGACGCCGAA CTGGGCCTGG CCTTCGACGG TGACGGCGAC
CGCCTGGGCA TCGTCACCAA GGACGGCCAG AACATCTTCC CCGACCGCCA GATGATGCTG
TTTGCCAAGG ACGTGCTCTC GCGCGTGCCG GGCGGCAGCA TCGTCTACGA CGTGAAATGC
ACGCAGCGCC TGGCGCCCGC CATCCGCGAG GCCGGGGGCG AGCCCGTGAT GTTCAAGACC
GGGCACTCCC TGGTCAAGGC CCGCATGAAG GAACTGGACG CGCCGCTGGG CGGCGAGATG
AGCGGTCACA TCTTCTTCAA GGAACGCTGG TACGGCTTCG ATGACGGCAC CTACGCGGGC
TGCCGCCTGC TGGAGATCGT CAGCCGCGAG GCCGACCCCA GCGCCTTGCT CAACGCGCTG
CCCACCAGCT TTTCCACCCC TGAACTGAAT GTGGCCTGCG CCGAGGGCGA GCCCCATCGC
CTGGCCGCCG AACTGCAGGC CCTGGCCGCC GAGACCTTTG CCGCACCGGC CCAGGTCAGC
ACCATCGACG GCCTGCGCGT GGACTGGGCC GACGGCTTCG GCCTGATCCG CGCCAGCAAC
ACCACGCCCG TGCTGGTGCT GCGCTTCGAG GGCCAGACCC AGGAGGCGCT GTCGCGCATC
GAGGCGCAGA TGCTGGCGCT GCTGGAGCGC GTCAAACCCG GCGCGCAGGT TGGCGGCGCC
GCGCACTGA
 
Protein sequence
MQVASSIFKA YDIRGIVPST LNEEVALGVG RAFGMAALAA GETVVAVGRD GRLSGPSLSA 
ALIAGLTEVG IEVIDIGLAT TPMLYYAAST LARSGIQVTG SHNPKDYNGF KMVLAGRAIY
GEEIQALRRR VESDDWTITG TGSVRRADVQ TDYQARIVGD VKLARPIKIV VDCGNGVAGA
SAPGIFRALG CEVIELFSEV DGEFPNHHPD PSKPENLRDV IEALRTSDAE LGLAFDGDGD
RLGIVTKDGQ NIFPDRQMML FAKDVLSRVP GGSIVYDVKC TQRLAPAIRE AGGEPVMFKT
GHSLVKARMK ELDAPLGGEM SGHIFFKERW YGFDDGTYAG CRLLEIVSRE ADPSALLNAL
PTSFSTPELN VACAEGEPHR LAAELQALAA ETFAAPAQVS TIDGLRVDWA DGFGLIRASN
TTPVLVLRFE GQTQEALSRI EAQMLALLER VKPGAQVGGA AH