| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3938 |
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| Symbol | |
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| ID | 5749521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4339148 |
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| End bp | 4339804 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641299036 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001564954 |
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| Protein GI | 160899372 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.189042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.262256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAATT TCGTCTTGCG GATATTAATT GCCGATGACC ATCCGGCAGT TCTGGCAGGC
ATAGAAAGTG TTTTGGAGGA CAAGCATGAA ATAGAGATTG TGGGTCGAGC AAAAAACTCC
ACGGAAATCA TAAGCTTTCT GAAGAAAAAC GAATGTGATG TGCTGGTGAC TGATTACTCC
ATGCCCGGTG GAGCCTACGG TGATGGTCTG GTGATGCTGA ATGTCATTCG TAAAAGATTT
CCAAGTGTCA AGATCGTCAT GCTCACAATG ATAGAGAATA TTGGAATCAT CAAATCTCTT
ACCAACCAAG GAATCTACAG AATTGTCCAT AAAACGGATT CTTTGGGAAG TCTGCTGCCC
GCCATCTACG CTGCATACAC GGATGGTCAA TTCATATCTC CCAGTGCAAG CAAGCTGCTG
GGAGGAGAAT GGCTGGGCGC GGTGCGTACA TCGATAGAGC TCTCAAAACG GGAAGAAGAG
GTTCTGCTTC TTTTCATCTC TGGCATGACG GTGTCCGAGA TAGCAAAAAA ACTCTATCGC
AGTATCAAGA CGGTCAGCAC GCACAAGGTG GCTGTCATGA ACAAGCTGGG TATACGCAAG
GACATTGATC TCATTCGCTA TGGAATTGAG ATGGGCTGGA TTGACGTAAG AAAATAG
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| Protein sequence | MKNFVLRILI ADDHPAVLAG IESVLEDKHE IEIVGRAKNS TEIISFLKKN ECDVLVTDYS
MPGGAYGDGL VMLNVIRKRF PSVKIVMLTM IENIGIIKSL TNQGIYRIVH KTDSLGSLLP
AIYAAYTDGQ FISPSASKLL GGEWLGAVRT SIELSKREEE VLLLFISGMT VSEIAKKLYR
SIKTVSTHKV AVMNKLGIRK DIDLIRYGIE MGWIDVRK
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