Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3936 |
Symbol | |
ID | 5749519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4335326 |
End bp | 4336021 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641299034 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001564952 |
Protein GI | 160899370 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.426907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.200888 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTCCA ATACGAATCA TAGAAAAGAT TTGAATATAT CCGTACTGCT GGCCGATGAT CATCCTGGAA TCATCTCAGG CATCCGGCAT GAGCTGTCTT CCGAGCTGGA AATCCTGTTG AAAGCCAGTG TTTCAAATTC AACCGATCTG GTAAAAAAAT TGGATGAGGG TGGCTTTGAC GTGCTTGTGT CGGATTACTC CATGCCTACA GGTCAATACG GAGATGGCTT GAATCTGTTT GGCTACATAT CCAGAAGATT TCCGAACCTG GGTTTGGTGG TTCTGACCAT GCTGGACAAT TCGGCCATTC TCCAGGCGCT GGGCAAGGTA TCGAACATCA GCATCGTTAG CAAGGCGGAC CCGGTGCTGC ATCTGGTTCC AGCCATTCAT GCCGCCTATA CAGGAGGGAC ATACTTCTCT CCCGCCATTT CCGAGCGACT GGAAAAAATG AATGCGGGTG TCATGGGCGG CGAAGGAAAA TCACCGGGGG TGCTCAGTCC CAAGGAATCG GAGGTGGTAA GGCTTTATGC GGCCGGTTTG CGTATCGACG AGATCGCGGC CAAGCTGAAC AGAAGCAAGA AAACCATCAG TACCCAGAAA GTCAAGGCCA TGCACAAGCT TGGAATTGAA CGGGACATTG ATCTGATGAA GTATGCCCTT GAGTGCGGAT GGGTGACCTC ATCGAGATCT CAATGA
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Protein sequence | MFSNTNHRKD LNISVLLADD HPGIISGIRH ELSSELEILL KASVSNSTDL VKKLDEGGFD VLVSDYSMPT GQYGDGLNLF GYISRRFPNL GLVVLTMLDN SAILQALGKV SNISIVSKAD PVLHLVPAIH AAYTGGTYFS PAISERLEKM NAGVMGGEGK SPGVLSPKES EVVRLYAAGL RIDEIAAKLN RSKKTISTQK VKAMHKLGIE RDIDLMKYAL ECGWVTSSRS Q
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