Gene Daci_3934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3934 
Symbol 
ID5749517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4333991 
End bp4334266 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content62% 
IMG OID641299032 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_001564950 
Protein GI160899368 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.222409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.184824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACCA CATACAAAGA ACTTCTGGCA CAGCGCGAGG CACTCGAGGC CCAGATCCAG 
GCAGCACGCA AACAAGAAGT CAGTGATGTG ATCGCCAAGA TTCGCGGCCT GGTTCAGGAT
TACGGCCTGA CTGCCGACGA CATCTTCACG GCACGCCGCG CCCCCTCTAC CGTGGCCCCC
AAGTTCCGCA ATCCCGAAAC CGGTGACACC TGGACCGGCC GTGGCAAGCC CCCCGCCTGG
ATCAAGGACA AGGATCGCGC CCAGTTCGCC ATCTGA
 
Protein sequence
MNTTYKELLA QREALEAQIQ AARKQEVSDV IAKIRGLVQD YGLTADDIFT ARRAPSTVAP 
KFRNPETGDT WTGRGKPPAW IKDKDRAQFA I