Gene Daci_3922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3922 
Symbol 
ID5749505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4322182 
End bp4323093 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content69% 
IMG OID641299020 
Producthypothetical protein 
Protein accessionYP_001564938 
Protein GI160899356 
COG category[S] Function unknown 
COG ID[COG3781] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.314293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0751799 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCC GGCCCCGCCC CCACTGGCTG CGCATGCTCT TCGTGCTGCG CGGCTCGGTG 
CTGCCCGACA TCCTGCCCCA GCTGATGGCT GCCACCCTGT TCGCCGTGCT GGTCACGGCC
CTGCACGGCC AGCTGTTCGC CTGGAAGGTG CCGCTGAACT TCGTGCCGTT TTCGCTGATC
GGGCTGACGC TGGCCATCTT CCTGGGCTTT CGCAACAGCA CCAGCTATGC GCGCTATTGG
GAGGCGCGCA CGCTGTGGGG CACCCTGCTC AACGAGACGC GCTCCCTGGT GCGCCAGGCC
CGGACCTTGA CGGACGTGCC GCAGCACGCC CCGGCCCTGG CCATGGTTCT GGCGGCCTTT
GTGCATGCGC TGCGCCACCA GTTGCGCGGC ACCGATGCCG CGGCCGACAT GCGCCGCCTG
CTGCCCGCCG CCGACTGCGA ACGCCTGGCC ACGGCGCGCT TCAAGCCTGC CGTGCTGCTG
CTCATGGCCG GCGAATGGCT GCAGGCGCGC CGCCAAGACG GCAGCCTGCA GCCCGTGCTG
GTGCCCGCCA TGGAGGCGCC CCTGTGCAAG CTGGGCGAGG CGCTGGGCGG CTGCGAACGC
ATTGCGGGCA CGCCGATTCC CTTCACCTAC GCGGTGATCA TCCATCGCAC CATCTACCTG
TACTGCCTGC TGCTGCCCTT CGGCCTGGTG GATTCCATCG GCTTCATGAC GCCGGTGATC
GTGGCCTTCA TCGCCTACAC CTTCTTCGCG CTGGAGGCCC TGGGCGCCGA GCTGGAGGAG
CCCTTCGGCA CGGCGCCCAA CGATCTGGCG CTGGACGCCA TGTCGCAGAT GATCGAGGCC
ACGCTGCGCG AGCTGACCGG CGAGGTGCTG CCGCCTGCGC CGCAGCACAA GGATGTGCTG
TTTCTGACCT GA
 
Protein sequence
MIIRPRPHWL RMLFVLRGSV LPDILPQLMA ATLFAVLVTA LHGQLFAWKV PLNFVPFSLI 
GLTLAIFLGF RNSTSYARYW EARTLWGTLL NETRSLVRQA RTLTDVPQHA PALAMVLAAF
VHALRHQLRG TDAAADMRRL LPAADCERLA TARFKPAVLL LMAGEWLQAR RQDGSLQPVL
VPAMEAPLCK LGEALGGCER IAGTPIPFTY AVIIHRTIYL YCLLLPFGLV DSIGFMTPVI
VAFIAYTFFA LEALGAELEE PFGTAPNDLA LDAMSQMIEA TLRELTGEVL PPAPQHKDVL
FLT