| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3913 |
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| Symbol | |
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| ID | 5749496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4309299 |
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| End bp | 4311068 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641299011 |
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| Product | YidE/YbjL domain-containing protein |
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| Protein accession | YP_001564929 |
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| Protein GI | 160899347 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2985] Predicted permease |
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| TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0230126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.101846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCTG CCCTCCCGGG GCAGCAGCTT CCGTTGCCTT GCGCCGCCGT GGACCTCAAC
CCAGAAGCAG AGGTGGCTGT GGACTTTCTC AGAAGCATCT TTCATCAGGC TCCGGAAATC
GCGCTGTTTG CGGCCTTGGC GCTCGGTTAC TGGGTGGGCA AGTTCAGGTT CGGGTCGTTC
CAGCTGGGGG GCGTGGCGGG GTCGCTGCTG GCGGCGGTGC TGATCAGCCA GGTGGGGGTG
ACCATTGATT CGGGCATCAA GGCGGTGCTG TTCGCGCTGT TCATCTATGC CGTGGGCTTC
GAGAGCGGGC CGCAGTTCTT CCGCTCGCTG GGGCGGCAGT CGGTCAAGGA GATCCTGATG
GCCCTGGTGG TGGCCGTGTC GGGGCTGGTC ACGGTGGTGG TGATCGCCCG GGTGTTCCAT
CTGGACAAGG GGCTGGCGGC GGGGCTGGCG GCGGGCGGGC TGACGCAGTC GGCCATCATC
GGCACGGCGG GCTCGGCCAT CGAGAAGCTG GGGCTGGCGC CCGACGAGGT GCAGCGCATG
CAGGCCAACG TGGCCATCGG CTATGCGGTG ACCTATATCT TCGGCTCCTT CGGCGCCATC
ATCATGTGCG TGAACGTGCT GCAGTGGCTG ACGGGCCGCA ATATCCGCGA GGACGCGATC
CAGGCCGAGC AGGAGCTGCT CAAGGGCGTG CGCGTGTACG GAACCGGCGA GTCACCGGCC
GTGCCGGATC TGGTGGGCCG CATTTTCCGC GTGGGACAGG CAGGCCGCAC CGTAGCGGAG
CTGGAGGCCA GCGCCACCGC CAACGGCGGC ACGGTGACGG TGGAGCGCAT ACAGCGCAAA
AACGCGCTGG TGGGCGTGGA CGGCAGCCTG GCTCTGGAGG CCGGCGACAT CATCTTGCTG
GTGGGCCGGC GTGCGGCCGT GGTGGCGCTG GGCGCCTCGG TGGGCGAGGA ACTGCAGGGC
GCCGAGGGCA TGGACGTGGT GATGGTGCGG CGCGACGTGG CCATCTCCAA CAACCAGTAC
CTGAACCGCA GCGTGAAGGA CATCCTGGAC AGCCTGTCGC AGGAGTTCAA GCACGGCGTG
TACGCGGTGG CGCTGATGCG CGCGGGCACG CCGGTGCCGA TTGCGCCGGC CACCATGGTC
ATGCCGGGCG ATGTGGTGAC GCTGTTCGGC ACGCCGCAGG ATGTGCAGAA GGCTGCGCAG
TCGGTGGGCC CCATCATCGT GCCCAGCGAC AAGACGGACT TTGTCTTCCA TGGCCTGGGC
ATCACGGTGG GCCTGCTGAT CGGGCTGCTG GTGCTGCGCC TGGGCTCCAT TCCCATCACG
CTGGGCAGCG GCGGCGGCGC CCTGCTGGCG GGCCTGCTGT TCGGCTGGTG GCGCAGCCGC
AAGCACACCT TCGGCAACAT GCCCACGGCC GCCTCCACGC TGCTGCGCGA CCTGGGCCTG
GCCGGCTTCG TGGCCATGGT GGGCCTGCAG TCGGGCCAGC AGGCCGTGAC CACGGTGATG
CAGCAGGGCC TGACGCTGTT CCTGCTGGGC GTGGTGGTGA CCATCGTGCC GCTGCTGATC
GCCATGCTGT TCGGCAAGTA CGTGCTGCGC TATGACAACG TGGCCGTGTT CGCGGGCTCG
CTGTCCGGGG CGCGCAGCGC CAACCCGGCG TTTGGCGAGA TTCTGGACAA GGCCGGCAAC
TCGATTCCCA CGGCACCGTT TGCGATCACC TATGCGCTGG CCAATGTGTT CCTCACATTG
CTGGGGCCGC TGGTCATCGC CTTTGCCTGA
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| Protein sequence | MPPALPGQQL PLPCAAVDLN PEAEVAVDFL RSIFHQAPEI ALFAALALGY WVGKFRFGSF
QLGGVAGSLL AAVLISQVGV TIDSGIKAVL FALFIYAVGF ESGPQFFRSL GRQSVKEILM
ALVVAVSGLV TVVVIARVFH LDKGLAAGLA AGGLTQSAII GTAGSAIEKL GLAPDEVQRM
QANVAIGYAV TYIFGSFGAI IMCVNVLQWL TGRNIREDAI QAEQELLKGV RVYGTGESPA
VPDLVGRIFR VGQAGRTVAE LEASATANGG TVTVERIQRK NALVGVDGSL ALEAGDIILL
VGRRAAVVAL GASVGEELQG AEGMDVVMVR RDVAISNNQY LNRSVKDILD SLSQEFKHGV
YAVALMRAGT PVPIAPATMV MPGDVVTLFG TPQDVQKAAQ SVGPIIVPSD KTDFVFHGLG
ITVGLLIGLL VLRLGSIPIT LGSGGGALLA GLLFGWWRSR KHTFGNMPTA ASTLLRDLGL
AGFVAMVGLQ SGQQAVTTVM QQGLTLFLLG VVVTIVPLLI AMLFGKYVLR YDNVAVFAGS
LSGARSANPA FGEILDKAGN SIPTAPFAIT YALANVFLTL LGPLVIAFA
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