| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3911 |
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| Symbol | |
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| ID | 5749494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4305937 |
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| End bp | 4306818 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641299009 |
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| Product | 2-dehydro-3-deoxyglucarate aldolase |
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| Protein accession | YP_001564927 |
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| Protein GI | 160899345 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0068475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0363616 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCT TCAGGAGAGC CCCCATGAGC ATGCTGCCCG CCAATACGTT CAAGCGCGCG
CTGCGCGAAG CCCGCCCGCA GATCGGACTG TGGTCCACCA TTCCCTCCCC CTTTGTCTGC
GAGATGATCG GCGGCGCGGG CTACGACTGG GTGCTGCTCG ATACCGAGCA CACGCCCACC
GACGTGCCGC TGATGCTGGG CCAGCTGCAG GCCGTGGCCG CCGCCCTGCC CGCACCGGGC
GCCCTGCCCG TGCATGCCGT GGTGCGGCCC GCCTGCAACG ATGCGGTGCT GATCAAGCGC
TACCTGGACC TGGGCGCCCA GTCCCTGCTG CTGCCCTTTG TGCAGAACGC GCAGCAAGCG
CGGGATGCCG TGCGCGCCAT GCGCTATGCA CCCCAGGGCA TGCGCGGCAT GGGCGGTTCC
ACTCGCGCAG CCAACTTCGG GCGCACGGCC GACTATGTGG CACGTGCGGC CGACGAGCTG
TGCCTGCTGG TGCAGGTGGA GACGGCCGAG GCGCTGGAGC AGATAGAGGC GATTGCGGCC
GTCGATGGCG TGGACGGCAT CTTCATCGGC CCCGCCGACC TGTCGGCCAG CCTGGGCTAT
CCGGGCCAGG CGCGCCACCC TGTGGTGAAC CGGGCCATCG ACCAGGCCAT CGCCCGCATC
CGCGCCTGCG GCAAGGCGCC GGGGATCCTG ATGGTGGACG AGGCACGGGC GCGCGAATGC
CTGGAGCTGG GCGCGCAGTT CGTGGCCGTG GCGCTGGACA CGCTCTTGCT GCGCGACGGG
CTGGATGCGG CGGCGGCGCG CTTCAGGAAA GGGCCGCTGG CCGCGAACCC ACCAGGGCCC
GCATCCACCG CCGGCAGCTA CCGAGGAGCC CCACAACCAT GA
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| Protein sequence | MNSFRRAPMS MLPANTFKRA LREARPQIGL WSTIPSPFVC EMIGGAGYDW VLLDTEHTPT
DVPLMLGQLQ AVAAALPAPG ALPVHAVVRP ACNDAVLIKR YLDLGAQSLL LPFVQNAQQA
RDAVRAMRYA PQGMRGMGGS TRAANFGRTA DYVARAADEL CLLVQVETAE ALEQIEAIAA
VDGVDGIFIG PADLSASLGY PGQARHPVVN RAIDQAIARI RACGKAPGIL MVDEARAREC
LELGAQFVAV ALDTLLLRDG LDAAAARFRK GPLAANPPGP ASTAGSYRGA PQP
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