Gene Daci_3901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3901 
Symbol 
ID5749484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4297375 
End bp4297773 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content66% 
IMG OID641298999 
Producthypothetical protein 
Protein accessionYP_001564917 
Protein GI160899335 
COG category[S] Function unknown 
COG ID[COG3339] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0698239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0160769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCG GTGAAAGATT GAAGGCCTGG GCACGACGCA TCAAGCGCGA TGGCGTCACC 
CTGTGGTTTG CCTGCAAGAG CCCCAAGACG CCCTGGTACG CCAAGGCCCT GGGCGCCTTT
GTGGTCGCCT ACGCCCTGAG CCCCATCGAT CTGATCCCCG ACTTCATCCC CGTGCTGGGC
TATGTGGATG ACGTCCTGCT GCTGCCCGCG CTGATCTGGC TCACCGTGCG GCTGCTTCCC
CCGGCCGTGT TGGCCGACAG CCGCCAGCAG GCCGAGGCCT GGATGCAGAC CCAAGGCTGC
AAGCCCCGAA GCCGTGCTGG AGTCGCCCTG GTGGTAGGCG TCTGGCTATG CGTTTGCGTG
GGGGCCTTCC TTGCGTTCCG AGGGCGCTGG GGTCTTTGA
 
Protein sequence
MTAGERLKAW ARRIKRDGVT LWFACKSPKT PWYAKALGAF VVAYALSPID LIPDFIPVLG 
YVDDVLLLPA LIWLTVRLLP PAVLADSRQQ AEAWMQTQGC KPRSRAGVAL VVGVWLCVCV
GAFLAFRGRW GL