Gene Daci_3891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3891 
Symbol 
ID5749474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4284860 
End bp4285444 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content68% 
IMG OID641298989 
Productflavin reductase domain-containing protein 
Protein accessionYP_001564907 
Protein GI160899325 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.824714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0240386 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGC ATATCGCCCC GGTCGATCTC GCCAAGTCCT ACCGGCTGAT CAACCACGGC 
CCCACCGTCC TGGTCTCGGC CCGCCATGGC GGCGTGGACA ACGTCATGGC CGCAGCCTGG
TGCTGCGCGC TGGACTTTGC GCCCCCGAAG CTCACCGTGG TGCTGGACAA GGCCACGGCC
ACGCGCGCCC TGGTCGAGCA CAGCGGCATG TTCGTGATCC AGGTGCCTAC GGCCGCCCAG
TTGCAGCTCA CGCACCAGGT CGGCACGCAC ACCCTTTCCA CCGATGCCGG CAAGCTCGCC
ACCAGCGGCG TTCAGCTGTT CGGCATGGAA GGGTTCGACC TGCCCTTTGT GGACGGCTGC
GCCGGCTGGC TGGCCTGCCG ACTCATCCCC GAGCCCCACA ACCAGCAGGC CTACGACCTA
TTCATCGGCG AGATCGTGGG CGCCTGGTCC GACACCCGCG TGTTCAGCGA CGGCCACTGG
CACTTCGAGG ACGCCGACCC CGCGCTGCGC AGCCTGCACT ACGTGGCGGG TGGGCAGTTC
TATGCGATTG GGCAGGCATT GAACGTGCAG GACGGATCGC CCTGA
 
Protein sequence
MNPHIAPVDL AKSYRLINHG PTVLVSARHG GVDNVMAAAW CCALDFAPPK LTVVLDKATA 
TRALVEHSGM FVIQVPTAAQ LQLTHQVGTH TLSTDAGKLA TSGVQLFGME GFDLPFVDGC
AGWLACRLIP EPHNQQAYDL FIGEIVGAWS DTRVFSDGHW HFEDADPALR SLHYVAGGQF
YAIGQALNVQ DGSP