Gene Daci_3886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3886 
Symbol 
ID5749469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4280167 
End bp4281222 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content67% 
IMG OID641298984 
Producthypothetical protein 
Protein accessionYP_001564902 
Protein GI160899320 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.576729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.153424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCAGC CAGAACACAT AAACATTCAA GGAGACAAGA TGGCAGGCAT CACAAAAAGA 
CAGGCGTTGG CCAAGGGCAT GGCGCTGGGC GCCATCGGCG TGGCTGCGTT CGCATCGCTG
TGCGGCGCGG CGCAGGCCAA TACCGATACC GGCGCCTGGC CCGACAGGCC GATTCGCCTG
GTCGTTCCCT TCCCGCCGGG TGGGCCCACC GATGGCGCGG CGCGCGTCTA CGCCGAGGCG
CTGGCGCGCC AGCTGGGCCA GCCCGTGGTG ATAGAGAACA AGCCCGGCGC ATCGGGCGCG
GTGGCGGCGG GCCAGTTCCG CACGGCTGCG CCTGACGGCT ACACGCTGAT GATGATGGTC
ACGCCCACCA TCATGGCGCC GCATTTCTTC AAGAACGTCA AGTTCCACAC GGCCACGGAT
TTCGCCCCGG TCACCAAGAT CTACGACCTG CCCAATGTGA TTGCGGTCAA TGCGCAGTCG
CTGCCCAAGG TGACGGACCT CAAATCGCTG TTCCAGTACG CCAAGGCGCA GCCCGCCACG
CTGGACTACA CCAGCTCCGG CGCGGGCAGC TCGGGCCACC TGAGCATGGA GCTGATGAAA
TCCGCCAAGC TGCACACCAT GCAGCACGTG GCCTACAAGG GCAGTGCGCC CGCCATGAAC
GACACGCTGG GTGGCGTGGT GCCGGTGATC TATGCGGACA TGGTGTCTGC GCTGCCCCAT
ATCCGCAGTG GCCGGCTGAG GGCGTTGGCG GTGGGCACGC CGCAGCGCGT GAAGGCGCTG
GACGGCGTGC AGACCATGGC CGAGCAGGGC TTTGGCGGCT ATGAGGCATC GTCCTGGGGC
GGCCTGGTGG CACCCAGGGA CACGCCGCGC GCCATCATCG ACAAACTCAG CGCCACCTCG
CGCCAACTGC TGGCCACCGA CGAGGTGCGC GACCGCTTCG AGAAGATCGG CGTGACGGCC
GCCTACCTCA ACCCCCAGGA TACCGAGGCC CTGATCCGCA GCGACTACAC CCGCTGGGGC
GAGGTGGTGC GCACCAACGG CCTGGGCGCG GAGTGA
 
Protein sequence
MGQPEHINIQ GDKMAGITKR QALAKGMALG AIGVAAFASL CGAAQANTDT GAWPDRPIRL 
VVPFPPGGPT DGAARVYAEA LARQLGQPVV IENKPGASGA VAAGQFRTAA PDGYTLMMMV
TPTIMAPHFF KNVKFHTATD FAPVTKIYDL PNVIAVNAQS LPKVTDLKSL FQYAKAQPAT
LDYTSSGAGS SGHLSMELMK SAKLHTMQHV AYKGSAPAMN DTLGGVVPVI YADMVSALPH
IRSGRLRALA VGTPQRVKAL DGVQTMAEQG FGGYEASSWG GLVAPRDTPR AIIDKLSATS
RQLLATDEVR DRFEKIGVTA AYLNPQDTEA LIRSDYTRWG EVVRTNGLGA E