Gene Daci_3872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3872 
Symbol 
ID5749455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4268875 
End bp4269345 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content36% 
IMG OID641298970 
Producthypothetical protein 
Protein accessionYP_001564888 
Protein GI160899306 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000118438 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAATA CCGAAAGATT GCTATCCTTC CTAGGTCATA CTTCGACAAG TGATGATTTT 
GAGTCATTTC TTCTCGAGAA TGACATAAAA AAGATGCCAA AGGGAGATTC AACAACAAGA
ATAAAAACCA AAGACAAATT GATTTCCATG GAATTTGACC CCACAGATTC ATACAAGGAA
AAATATCTTT CCCCACCCAT TGGGGACGGC TGGTTCACTT TTGAATCCTT CGACATAAAT
AAAGGCTTTG AAAAAGAAAA TCCATTCAAC CTCGCTTTTG CAATGGACAA ATCACAGGTT
GAAGAAAAAT TGGGGAAATC AGTCAGCAAG AATCAGGAAG ACCTTGTTCA AGCGTATCAA
AAGGACAACC ACATAATTAT CATATTCTAT AAAAACAAGT GGAAAGGCAT AGAAACCATA
AGAATAAGAA AGATTAACAA ATTCGACGCA AAGAATCTCA ACCTTAAATA G
 
Protein sequence
MMNTERLLSF LGHTSTSDDF ESFLLENDIK KMPKGDSTTR IKTKDKLISM EFDPTDSYKE 
KYLSPPIGDG WFTFESFDIN KGFEKENPFN LAFAMDKSQV EEKLGKSVSK NQEDLVQAYQ
KDNHIIIIFY KNKWKGIETI RIRKINKFDA KNLNLK