| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3860 |
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| Symbol | |
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| ID | 5749443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4253462 |
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| End bp | 4254562 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641298958 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001564876 |
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| Protein GI | 160899294 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.818358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGGCCA CCGGGCCCGA AGACGCCCGG GCGCGCCTGT TCTGGCAGCG CCTGAGCGCC
AAGCCCTACC AGTTCGACCT GATGCACAGC CTGCGCTACC TGCAGGCACG CCATCCCGCG
CTGCCGCGCC TGGGCCAGGC CACGCGCCCC AAGGACGAGC CGCTGCGCCT GGGCCAGGAC
CCGTCGCTGG CCTTCGCCCC CGCCACCATT GCCGAAATCC TGCCCTCGCG CGCCGGCGAG
CCCGAGCGCA TGACGGTCTG GAACTTCGGC CTCTACGGCC CCAACGGCCC GCTGCCCACG
CACATCACCG AATACGTGCG CGAGCGCCTG CGCCAGCATG ACGACGCCAC GCTGGCACGC
TTTTCCGACA TCTTTCACCA CCGCATGCTG CTGCTGCTGT TCCGCGCCTG GTCGGACGCA
CAGCCCACCG CATCGCTGGA CCGCCCGGGC GAAGACCCCT TTGGCCGCTA CATAGACAGT
TTCATAGGCG CCGGCCTGCC CAGCCAGCGC GCGCGCGACG ACGTGCCAGA CCACGCCAAG
CGCTTCATGG CCGGCCATCT GACCCGCTGG ACGCGCAACC CCGAAGGACT GTGCCAGGCC
CTGTCGCACT ACTTCCAGAT TCCGGTGAAG CTGGAAGAAA ACTGCCTGCA CCACCTGGAG
CTGGAGCCCG AGCAGCAGAC CCGGCTGCAG GGCCGCCCCT GCAACTCGCG TCTGGGCGTG
GACGCCGTCG TGGGCTCGCG CGTGCCCGAT GCGCAAAGCA AGTTCCGCCT GGTGCTCGGC
CCGCTGGGTC TGGAGCAATA CCGGCAGCTG CTGCCCCAGG CCGCACTGTT CCAGACCCTG
GTGGACTGGG TTCGCAACTA CCTGGGCATC GAATTCGCCT GGGACTACGT GCTGGTGCTG
CGCCGCCAGG AAGTACCTGC AGCCCGGCTG GGCAGCAGCA CCCAGCTGGG CTGGACCACC
TGGCTCACCC ACGCCGAGCC CGCCCAGGAC GCGCGCGACT TCCGCCTGGA CCCCGAAGCC
TGGCTGCGCC AGCGCCGCCA GCCCGTGCGC GGCCGGCGCC CGGGCCCCAG CCCTCGAACC
ACTGAATCAC CGAACCACTG A
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| Protein sequence | MQATGPEDAR ARLFWQRLSA KPYQFDLMHS LRYLQARHPA LPRLGQATRP KDEPLRLGQD
PSLAFAPATI AEILPSRAGE PERMTVWNFG LYGPNGPLPT HITEYVRERL RQHDDATLAR
FSDIFHHRML LLLFRAWSDA QPTASLDRPG EDPFGRYIDS FIGAGLPSQR ARDDVPDHAK
RFMAGHLTRW TRNPEGLCQA LSHYFQIPVK LEENCLHHLE LEPEQQTRLQ GRPCNSRLGV
DAVVGSRVPD AQSKFRLVLG PLGLEQYRQL LPQAALFQTL VDWVRNYLGI EFAWDYVLVL
RRQEVPAARL GSSTQLGWTT WLTHAEPAQD ARDFRLDPEA WLRQRRQPVR GRRPGPSPRT
TESPNH
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