| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3850 |
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| Symbol | |
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| ID | 5749433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4245030 |
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| End bp | 4245572 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641298948 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001564866 |
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| Protein GI | 160899284 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.453706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTCA CCAAAACCGG CAAGAGTGGT CAGAAATTCA TCGCGCGCAA CCGTGCGCCG
CGCGTGCAGA TCGAGTACGA CGTCGAGATC TACGGCTCGG AAAAGAAGGT GCAGATCCCC
TTCGTGATGG GTGTGCTGGC CGATCTGTCG GGCAAGCCCG TCGATCCGCT GCCCGAAATC
GCCGACCGCA AGTTCCTGGA AATCGACATC GACAACTTCG ATGCGCGCAT GAAGTCCATC
AAGCCCCGCG TCGCCTTCCA GGTGGACAAC ACGCTGACGG GCGAGGGCAA GCTCAACATC
GACCTGAGCT TCGAGAGCAT GGAGGACTTC TCCCCCGCCG CCATCGCGCG GCGCGTGGGC
GCGCTCAACT CGCTGCTGGA GGCACGCACC CAGCTGCACA ACCTGCTGTC CTACATGGAC
GGCAAGCAGG GCGCCGAGGA GCTGATCGGC AAGGTGCTCA AGGACCCTGC GCTGCTCAAG
TCGCTGGCCG CCGCGCCCAA CATCACTGCC CCGCAGGCCT CGGGCCCTGC ATCCGAGGCT
TGA
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| Protein sequence | MSLTKTGKSG QKFIARNRAP RVQIEYDVEI YGSEKKVQIP FVMGVLADLS GKPVDPLPEI
ADRKFLEIDI DNFDARMKSI KPRVAFQVDN TLTGEGKLNI DLSFESMEDF SPAAIARRVG
ALNSLLEART QLHNLLSYMD GKQGAEELIG KVLKDPALLK SLAAAPNITA PQASGPASEA
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