| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3808 |
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| Symbol | |
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| ID | 5749391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4189228 |
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| End bp | 4189974 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641298906 |
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| Product | RNA polymerase sigma-70 family protein |
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| Protein accession | YP_001564824 |
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| Protein GI | 160899242 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5343] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.178048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.362907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGGCG ACACCCACCC CAATCCCTCA GGGTCGACGG ATGACGGCTC CCCGGACGAT
CTCCAGATGC AGGCCGGCGA GTACGTATTG GGCACCCTCA ATGCAGCCCA GCGCCGCTCC
ATCGAATCCC GTCTGCCCTA CGAGCCTGCG TTGCGCACGG CCGTGCAGGC GTGGGAGCAA
CGGCTCCTGC CGCTGGTTCA GCTGGCGCCC CCCATCGAGC CCTCCGCAAC GCTGTGGCAG
CGCATCGCAG CCAGCGTCAA GCCGGCCCGG CCAGCGGTCC GCGCACAGCG TGGTGCCTGG
TGGCACTGGG ATAGCCTTGC CCTTTGGCGC GGTTTGGCGG GTGGCGGCTT TGCAGCTGCA
GCACTGCTAG CGGCTGTGCT GGTGGTGCGA GAGGCATCAC CGCCGGCTGC CCCGCGCTAT
TTCGTCGTGC TGGCCGCGCC GCAGAATCAG GCCCCCGGGT GGGTGGTCCA GGCCCAGTCT
GAAGGCCGTC TGCGCCTTTT GCCACTGGGC AAGGATGCCA TTCCGGCGGA AAAATCCCTG
CAGTTCTGGA CCAAGGCCGA CGGCTGGAAA GCGCCGGTGT CCCTGGGTCT GGTCAAACCG
GGCGAAGCCA TCGAAGTGCC GGTAGACCAG TTGCCGCCTC TGCAGCCGAA TCAGCTTTTC
GAGCTCACCC TGGAGCCAGA AGGCGGCTCC CCGATCGGTC GCCCGACAGG GCCCATTCAG
TTCATCGGCC GCGCTGTACA GATCTAG
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| Protein sequence | MSGDTHPNPS GSTDDGSPDD LQMQAGEYVL GTLNAAQRRS IESRLPYEPA LRTAVQAWEQ
RLLPLVQLAP PIEPSATLWQ RIAASVKPAR PAVRAQRGAW WHWDSLALWR GLAGGGFAAA
ALLAAVLVVR EASPPAAPRY FVVLAAPQNQ APGWVVQAQS EGRLRLLPLG KDAIPAEKSL
QFWTKADGWK APVSLGLVKP GEAIEVPVDQ LPPLQPNQLF ELTLEPEGGS PIGRPTGPIQ
FIGRAVQI
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