| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3807 |
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| Symbol | |
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| ID | 5749390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4188653 |
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| End bp | 4189231 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641298905 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001564823 |
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| Protein GI | 160899241 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.184385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.356055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCCGCCCG CTGCCTCCCA GAACAACGAA GCTTTCGACC ATGACGCAGC ATTGCATGCA
TGTGCACGCG GCGAACGCGA TGCTTTGCAG CGCATTTATG AGGCCGAGGC GCGCTTTCTC
CTCGGCGTGG CACTGCGCAT CGTCCGCGAT CGCGCCGCTG CGGAAGACGT GCTGCACGAT
GCGTTTGTCT CCATCTGGAA CCGCTCATCC ACCTTCGACG GCAATCGCGG AAGTGGTCGA
GGGTGGATCT ACAGCGTGGT GCGGCACGCC GCCCTCAACC GTGTACGGGA TGGCGCACGC
GAAACCTTGC TGGATGAAAC GGCCCATGAA GCGCATGACG CCCAGGCCGC ACTTTCGGCA
TGGAAGGAAG GCGGCAGTGA ATGGGAGCGG CAGGCGACGC TGGGTCGTCT TGGCGATTGC
CTCGACCGGC TGGAGCCCGA GCGCCGCGCC TGCCTGTTGC ACGCCTACGT GGACGGCTGC
AGCCACAGCG AAATTGCGGC GCGTGTGCAG GCGCCGCTTG GTACGGTCAA GGCCTGGGTT
CAACGCGGAC TGCGTGCCCT GAGAGAGTGC ATGCAATGA
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| Protein sequence | MPPAASQNNE AFDHDAALHA CARGERDALQ RIYEAEARFL LGVALRIVRD RAAAEDVLHD
AFVSIWNRSS TFDGNRGSGR GWIYSVVRHA ALNRVRDGAR ETLLDETAHE AHDAQAALSA
WKEGGSEWER QATLGRLGDC LDRLEPERRA CLLHAYVDGC SHSEIAARVQ APLGTVKAWV
QRGLRALREC MQ
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