Gene Daci_3741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3741 
Symbol 
ID5749324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4109310 
End bp4110401 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content70% 
IMG OID641298840 
Producthypothetical protein 
Protein accessionYP_001564758 
Protein GI160899176 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0499981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.188301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAACAC CCCGCATCTT CCGCGCCCCG ATTGCCGACT ACGCCCAATC ACCCCAATCG 
GCGGGCGGGC GCTTTCGCAA CGTCCATCCC CGCCCCGCCA ACGCGCCCCA GCCCGACGCC
AAGGTGATGT GGGACTTCTT CTTCAACAAG CCCAAGGACA CCGAGCCTGC GGCGCCCCTG
CCCGTGCAGC GGCTCACCCC GGCCGACCTG GCCGCCGCGC CCGAGCGCAG CCTGTACCGC
CTGGGCCACT CCACGCTGCT GATGAAGCTG CGCGGCGGCT GGTGGATCAC CGACCCGGTG
TTTGCCGAGC GCGCCTCGCC CTTTTCCTTC ATCGGCCCCA AGCGCTTTCA TGCGCCGCCC
ATCGCCCTGC ATGAACTGCC CGCGCTGCGC GGCGTGGTGC TCTCGCACGA CCACTACGAC
CATCTGGACC GTGCCACCAT CCGCGCCCTG GCGCCCCGGG TCGACATCTT CCTGTGCACG
CTGGGCGTGG GCGACCGGCT CATGGACTGG GGCGTGGCCC CCGAGAAGGT GCGCCAGTTC
GACTGGTGGC AGGACGTGCA GGTGGACGGC CTGCGCTTCA CGGCCACGCC GGCCCAGCAT
TTCTCGGGCC GGGGCCTGCG CGACGGCAAC CGCACGCTGT GGGCGTCCTG GGTCATCGAG
GACCTGGAAA GCGCCGACAC GCTGCGTGTC TTCTTCAGCG GCGACGGCGG CTATTTCGAT
GGCTTTGCGG AAATCGGCCG GCGCTTCGGT CCCTTCGACC TCACGCTGAT GGAAACCGGC
GCCTACGACC CGCACTGGCC CTATGTGCAC ATGCACCCGG CCCAGACCGT GCAGGCCCAC
CGCGACCTGG GCGGACGCTG GCTGCTGCCC ATTCACAACG GCACCTTCAG CCTGGCCATG
CATGCCTGGT GGGACCCCTT CGAGCGCGTG CTGGCCCTGG GTGCCGAGCA CGGCATTGCC
GTGGCCACCC CCATGATGGG CGAGCGCGTG GACCTGGCCG CCCCCCATGC AGGCGAGCGC
TGGTGGCGTG CCCTGGTATC CCCTGCCGTG CAGGACGCAG CCGCGTCAGC GCCACAGGCC
CAGCCGCGAT AA
 
Protein sequence
MKTPRIFRAP IADYAQSPQS AGGRFRNVHP RPANAPQPDA KVMWDFFFNK PKDTEPAAPL 
PVQRLTPADL AAAPERSLYR LGHSTLLMKL RGGWWITDPV FAERASPFSF IGPKRFHAPP
IALHELPALR GVVLSHDHYD HLDRATIRAL APRVDIFLCT LGVGDRLMDW GVAPEKVRQF
DWWQDVQVDG LRFTATPAQH FSGRGLRDGN RTLWASWVIE DLESADTLRV FFSGDGGYFD
GFAEIGRRFG PFDLTLMETG AYDPHWPYVH MHPAQTVQAH RDLGGRWLLP IHNGTFSLAM
HAWWDPFERV LALGAEHGIA VATPMMGERV DLAAPHAGER WWRALVSPAV QDAAASAPQA
QPR