| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3739 |
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| Symbol | |
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| ID | 5749322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4107092 |
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| End bp | 4108540 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641298838 |
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| Product | D-alanine/D-serine/glycine permease |
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| Protein accession | YP_001564756 |
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| Protein GI | 160899174 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0151839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.192087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACACA AGGCCCCGCC AGCCGGCCAG GGCCTGCACG GTCAAGACGA CCTGCAGCGC
AATCTCACCA ACCGCCATAT CCAGCTCATC GCCATCGGCG GGGCCATCGG CACGGGCCTG
TTCATGGGCT CGGGCAAGAC CATCAGCCTG GCCGGCCCGT CCATCATCTT TGTCTACACC
ATCATCGGCG TGATGCTGTT CTTCGTGATG CGTGCCATGG GCGAGTTGCT GCTGTCCAAC
CTGCAGTACC GCTCCTTCAT CGACTTCTCG TCCGACCTGC TCGGCCCCTG GGCCGGCTTC
TTCACGGGCT GGACGTACTG GTTCTGCTGG ATCGTCACGG GCATTGCCGA CGTGATTGCC
ATATCGGCCT ACTCCCAGTT CTGGTTCCCG GACCTGCCGC AGTGGGCACC GGCCATCGCC
TGCGTGGGCC TGCTGCTGGG CCTGAACCTG CTGACGGTGA AGCTGTTCGG GGAGATCGAG
TTCTGGTTCG CCATGATCAA GATCGTGGCC ATCGTGGCCC TGGTGGGCAC GGGGCTGTAC
ATGGTGGGTG CCGCCTTCGT CTCGCCTGCT GGCCGCACGG CCAGCCTGTC AAATCTCTGG
AATGACGGCG GCATGTTCCC CAACGGGATG ATGGGTTTCT TCGCGGGCTT CCAGATCGCG
GTGTTCGCCT TCGTGGGCAT CGAGCTGGTG GGCACCACGG CGGCCGAGGC CAAGGACCCC
GAGCGCACGC TGCCGCGCGC CATCAATTCG ATTCCCGTGC GCATCATCGT GTTCTACGTG
CTGGCCCTGA TCGCCATCAT GGCCGTCACC CCCTGGCGCG ACGTGGTGCC CGGCAAGAGC
CCGTTCGTGG AGTTGTTCGT GCTCGCAGGC CTGCCGGCCG CCGCAGGCGT GATCAATTTC
GTGGTGCTGA CCTCGGCCGC CTCGTCGGCC AACAGCGGCG TGTTCTCCAC CAGCCGCATG
CTCTACGGCC TGGCGCTCAA GGGCGATGCG CCCAAGACCT TCCACCGGCT GTCGCGCAGC
AGCGTGCCTT CGCGCGGGCT GCTGTTTTCC TGCACCTGCC TGCTGGCCGG CGCGTTTCTG
ATGTGGGTGG TGCCCGATCT GGTGGAAGCC TTCACGCTGG TGACCACGGT ATCGGCCATT
CTGTTCATGT TCGTGTGGTC GCTGATCCTG CTGTCCTATA TCGCCTACCG GCGCCAGCGC
GCGGCCCTGC ATGAGGCTTC GCGCTACAAG ATGCCCGGCG GCGTGGCCAT GTGCTGGGCC
TGCCTGGTGT TCTTTGCCGC CATCCTGGGC CTGCTGACCC TGCAGGCCGA CACGCGCCAG
GCGCTGGTGG TGACGCCGGC CTGGTTTGCC CTGCTGGCCA TCGCCTACCA GTTCGTGCGC
CGCCAGGCAT CGCGCCAGTC GGCGGAGCGC TCCACCGCCC TTGCGGGCAC GGCAGCCGAA
CCGCGCTGA
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| Protein sequence | MTHKAPPAGQ GLHGQDDLQR NLTNRHIQLI AIGGAIGTGL FMGSGKTISL AGPSIIFVYT
IIGVMLFFVM RAMGELLLSN LQYRSFIDFS SDLLGPWAGF FTGWTYWFCW IVTGIADVIA
ISAYSQFWFP DLPQWAPAIA CVGLLLGLNL LTVKLFGEIE FWFAMIKIVA IVALVGTGLY
MVGAAFVSPA GRTASLSNLW NDGGMFPNGM MGFFAGFQIA VFAFVGIELV GTTAAEAKDP
ERTLPRAINS IPVRIIVFYV LALIAIMAVT PWRDVVPGKS PFVELFVLAG LPAAAGVINF
VVLTSAASSA NSGVFSTSRM LYGLALKGDA PKTFHRLSRS SVPSRGLLFS CTCLLAGAFL
MWVVPDLVEA FTLVTTVSAI LFMFVWSLIL LSYIAYRRQR AALHEASRYK MPGGVAMCWA
CLVFFAAILG LLTLQADTRQ ALVVTPAWFA LLAIAYQFVR RQASRQSAER STALAGTAAE
PR
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