Gene Daci_3731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3731 
Symbol 
ID5749314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4100005 
End bp4100394 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content64% 
IMG OID641298830 
Producthypothetical protein 
Protein accessionYP_001564748 
Protein GI160899166 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000487251 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0067092 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCAAA CAACGGTCAC CAACCGCCGC TACCAGAAGG AGCTGGGATT TGCGCTGCTG 
CTCTACATGG CGCTGCTTGT GGGGGCGCTT TTGCTCAGCG CCGACATGCA GGCCGGGGCC
CTGCGCACGG CGCTGCTGCT CAGCCCCATG CTGGCGTTTG CGCTGGCCGT GCGGGCCATC
GTGCGCCTGG TGCGCGATAC CGACGAGTTC CTGCGCAAGT CCATGCTGGA GCAACTGGCG
ATTGCAGCGG CGGGCACGGC TGGCATCACC TTCACCTACG GATTCCTGGA AATGGCAGGT
TTTCCCAAGC TCAGCATGTT CATGGTGTGG CCCTTGATGG GGGCGCTCTG GGTGGCTGCC
TCGGTGGCCC ACTGGCTGCG CAGCCGATGA
 
Protein sequence
MNQTTVTNRR YQKELGFALL LYMALLVGAL LLSADMQAGA LRTALLLSPM LAFALAVRAI 
VRLVRDTDEF LRKSMLEQLA IAAAGTAGIT FTYGFLEMAG FPKLSMFMVW PLMGALWVAA
SVAHWLRSR