| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3730 |
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| Symbol | |
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| ID | 5749313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4097699 |
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| End bp | 4099612 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298829 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001564747 |
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| Protein GI | 160899165 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0159073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0113192 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACCC TCGCCCTCGC GCGCGCCCCT GGCGCCGCTC TTCGCTCGCC CTCGGCGTTC
CCCGTACTGC GCACGTTGTC CGCCCTGGCT GCGGCCTCGC TGCTGGCCTG CCAGGCCCAA
GCACAGGTAC AACAGGCACA ACAGGCGCAG CGCGCACAGA CCTCCCAGCT CGATACCGTG
GTCGTCACCG CCTCGCGCAG CGAGCAGCCC CTGCGCACCG TCACGGCCGA CATGACCGTG
ATCGACGCCG AGACCATTGC CCGCAGCGGC GCCACGGGTG TGGCGGACCT GCTGGTGCAG
GTGCCGGGCG TGCAGATCAA CCGCAATGGC GGGCCGGGCC AGGTCACCTC GGTCTACCTG
CGCGGCACCA GCAACCAGCA CACTGCCGTG TTCATCGACG GCGTGCGCTA CAGCTCGCAG
GAGCTGCAGG GCGGCGCGGT CTGGTCCACC CTGCCGCTGG CGCAGATCGA GCGCATCGAA
GTGCTGCGCG GCCCGGCCGC CGCCATCTAT GGCTCAGACG CCATGGGCGG CGTGATCCAG
ATCTTCACCA AGCGGGCGGA CGGCCAGACC CGCGCCTATG CCGAGGCTGG CATAGGCAAC
CAGGGCACCA GCAAGCTGGC CACGGGATTT CAGGGCGGAG CCGACGGCTT CACCTACGGG
CTGAACCTGG CTGACGAGCG CAGCGACGGC TTCGACGTCT ACCCCGGCAA CACCTTCTCG
CCCAACCCGG ACAAGGATGG TTACAGCAAC ACCTCGCTGG GCCTGAACGC GGGCTACAAA
ACGGGCATCC ACCAGATCGA TGCCAGCCTG CTGTACAGCC GCCTGCGCAC CCACTACGAC
CAGAGCCCGC CGCCGTTCGA CGACTACGAC GTGGTCAAGA ACACCACCGG CAGCCTGCGC
TGGCAGGCCG GCTGGAACGC CATGTACAAA AGCGTGGTCC AGATCTCCCA TACCGACAGC
CAAAGCGACC GCCACACCCA GTCGCCCGAA AGCGCCAAGG GCCGCTCCAC CAACTACCTG
CTGCAGAACC TGTTCACGCT GGGCCAGCAC CGTTTCAACA TCGGCCTGGA GCGCCGCGAG
GACAAGCTGG ACACGCAATA CGCCTGGACG CAGAACACCG ACAGCCGGCG CGTGCAGAAC
TCCCTGTCGG CCGGCTGGCG CCTGACCGAG GGCCGCCACC AGTTCGACGC CAACCTGCGC
CACGACCAGG TGCGCGACCA GCAGAACAAG ACCACGGGCG GCCTGGGCTA CGGCCTGCAG
ATCGACGAGC GCTGGCGCTG GGTGGCATCG GCCGGCACGG CCTTCCGCAC GCCCACGCTG
TACGAACGCT TCACGGGCCA GGCGGCGGCC GACCTCAAGC CCGAAAGCAG CACCAACGTG
GAAACGGGCC TGCACTATGC GGCCGGTGCC AACCGCCTCT CGGCCGTGGT CTACCGCAAC
AAGTTCAAGA ACCTGATCAC CTACGACTGG AACAGCGCCG TTCCCTGCAA CTGCTACCGC
AACTGGCAGA GCGTGGAGAT CACCGGCCTG ACGCTGGCGG GCAGCACGCG CCTGGGCAGC
GCCAATCTGG GCGCCTCGCT GGACTTCATG AACCCCGAGA ACCTGGAGAC CGGCAAGCTG
CTGCCCTACC GCTCCAAGCG CATGCTCAAG CTCAACGCCG ACACCCAGGC GGCCGGCTGG
ACGCTGGGCG GCGAAGCGCA GCTGTACAGC GGCCGCTACG CAGACGAGGC GAACACCTTC
AAGCTGGGGG GATACGGCGT GGTCAACCTC TACGCCCAGC GCCAGCTGAC CAGGCAATGG
ACGCTGCTGG CCCGTGTCAA CAACATCGCC GACCGCGACT ACGCCCCCAC GCGCGGCTAT
GCCAACGCAG GCCGCACCGT GTTCGTCAGC GTGCGCTGGA CACCTCTGCC CTGA
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| Protein sequence | MHTLALARAP GAALRSPSAF PVLRTLSALA AASLLACQAQ AQVQQAQQAQ RAQTSQLDTV
VVTASRSEQP LRTVTADMTV IDAETIARSG ATGVADLLVQ VPGVQINRNG GPGQVTSVYL
RGTSNQHTAV FIDGVRYSSQ ELQGGAVWST LPLAQIERIE VLRGPAAAIY GSDAMGGVIQ
IFTKRADGQT RAYAEAGIGN QGTSKLATGF QGGADGFTYG LNLADERSDG FDVYPGNTFS
PNPDKDGYSN TSLGLNAGYK TGIHQIDASL LYSRLRTHYD QSPPPFDDYD VVKNTTGSLR
WQAGWNAMYK SVVQISHTDS QSDRHTQSPE SAKGRSTNYL LQNLFTLGQH RFNIGLERRE
DKLDTQYAWT QNTDSRRVQN SLSAGWRLTE GRHQFDANLR HDQVRDQQNK TTGGLGYGLQ
IDERWRWVAS AGTAFRTPTL YERFTGQAAA DLKPESSTNV ETGLHYAAGA NRLSAVVYRN
KFKNLITYDW NSAVPCNCYR NWQSVEITGL TLAGSTRLGS ANLGASLDFM NPENLETGKL
LPYRSKRMLK LNADTQAAGW TLGGEAQLYS GRYADEANTF KLGGYGVVNL YAQRQLTRQW
TLLARVNNIA DRDYAPTRGY ANAGRTVFVS VRWTPLP
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