Gene Daci_3715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3715 
Symbol 
ID5749298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4082735 
End bp4083439 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content70% 
IMG OID641298814 
Productglutamine amidotransferase 
Protein accessionYP_001564732 
Protein GI160899150 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.508237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0051367 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAG CCATCGCGCT GCGCCACATC CACTTCGAAG ACCTGGGCAC CCTGCATGCC 
GAGTTCGCCA GCCGCGGCTA CGAAGTGCAG TACGTCGATC CCAGCATCGG CGAGCTTGAC
ACCCTGGACC TGGGCCGTGC CGACCTGCTT GTCGTGCTGG GCGGCCCCAT AGGTGCCTAT
GACGAGGCGC TTTATCCCTT CGTCGCCCAG GAGCTGGCGG CCGTGCGCCG CTGGCTGGAC
AGCGGCAAGC CGCTGCTGGG CATCTGCCTG GGCGCCCAGC TCATTGCGCG CGCGCTGGGC
GCCAGGGTCT ACCCGCTGGG CGTCAAGGAA ATCGGCTTTT CGCCGCTCAC GCTCACCGAC
GCCGGCCTGG CCTCGCCCCT CGCCAAACTG GACGGCGTGC CCGTGCTTCA TTGGCATGGC
GACCAGTTCG ACATTCCCGA AGGCGCCGTG CACCTGGCTG GCACCGCCAT CGGCGCCAAC
CAGGCCTTCG CCGTCGGCTC GCAGGTGCTG GGCCTGCAAT TCCATCTGGA GGCCGACGCG
GCCCGGCTGG AGCGCTGGCT GGTGGGCCAT GCCTGCGAAC TGGGCGTCGC CCAGGTGGAC
CCGCGCACGC TGCGCGCCGA TGCCCAGAAA TACGGCGGCC TGCTGGCGCT GGCCGCGCGC
GATGTGCTGG CCGGATGGCT GGCCAACCTG GCGCGCAGCC GCTGA
 
Protein sequence
MKKAIALRHI HFEDLGTLHA EFASRGYEVQ YVDPSIGELD TLDLGRADLL VVLGGPIGAY 
DEALYPFVAQ ELAAVRRWLD SGKPLLGICL GAQLIARALG ARVYPLGVKE IGFSPLTLTD
AGLASPLAKL DGVPVLHWHG DQFDIPEGAV HLAGTAIGAN QAFAVGSQVL GLQFHLEADA
ARLERWLVGH ACELGVAQVD PRTLRADAQK YGGLLALAAR DVLAGWLANL ARSR