Gene Daci_3646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3646 
Symbol 
ID5749229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4008220 
End bp4008567 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content65% 
IMG OID641298745 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_001564663 
Protein GI160899081 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0170125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.308444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA AAATCTACGT GGGCAATCTG CCCTACTCCG TGACCGACTC CAGCCTGGAA 
AGCAACTTTG CCGAGTTCGG CAACGTGGCC TCCGCCAAGG TCATGATGGA CCGCGAAACC
GGCCGCTCCA AGGGCTTCGG CTTTGTGGAG ATGGCTTCTG CCGAAGTCGC CCAGGCCGCC
ATCACCGGCC TGCACGGCAT GTCCGTGGAC GGACGCTCGA TCGTCGTGAA CCTGGCCCGT
CCCCGTGAAG AAGGCCGCAG CTCCGGTGGT TACAGCCCGC AGGGTTACGC CGGCAAGCGT
TCGGACGTCG GCTACGGCAA TGGCGGCCAC GGCGGCGGTC GCTACTGA
 
Protein sequence
MTTKIYVGNL PYSVTDSSLE SNFAEFGNVA SAKVMMDRET GRSKGFGFVE MASAEVAQAA 
ITGLHGMSVD GRSIVVNLAR PREEGRSSGG YSPQGYAGKR SDVGYGNGGH GGGRY