Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3646 |
Symbol | |
ID | 5749229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4008220 |
End bp | 4008567 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641298745 |
Product | RNP-1 like RNA-binding protein |
Protein accession | YP_001564663 |
Protein GI | 160899081 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0170125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.308444 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCA AAATCTACGT GGGCAATCTG CCCTACTCCG TGACCGACTC CAGCCTGGAA AGCAACTTTG CCGAGTTCGG CAACGTGGCC TCCGCCAAGG TCATGATGGA CCGCGAAACC GGCCGCTCCA AGGGCTTCGG CTTTGTGGAG ATGGCTTCTG CCGAAGTCGC CCAGGCCGCC ATCACCGGCC TGCACGGCAT GTCCGTGGAC GGACGCTCGA TCGTCGTGAA CCTGGCCCGT CCCCGTGAAG AAGGCCGCAG CTCCGGTGGT TACAGCCCGC AGGGTTACGC CGGCAAGCGT TCGGACGTCG GCTACGGCAA TGGCGGCCAC GGCGGCGGTC GCTACTGA
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Protein sequence | MTTKIYVGNL PYSVTDSSLE SNFAEFGNVA SAKVMMDRET GRSKGFGFVE MASAEVAQAA ITGLHGMSVD GRSIVVNLAR PREEGRSSGG YSPQGYAGKR SDVGYGNGGH GGGRY
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