| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3620 |
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| Symbol | |
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| ID | 5749204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3983219 |
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| End bp | 3984592 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641298721 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_001564639 |
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| Protein GI | 160899057 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0440063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0507451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTATC AGCTCTACGA AATCCAGCGC GCCATGGTCG AGCCCTTTGC CGATTTCGCG
CAAGCTGCAG CCAAGCTCTA CAGCAACCCC CACTCGTTGC TGAGCCAAGG TCCGATGTCC
CAGCGCATGG CCGCCGGGTT CGATCTGTTC TACCGCCTTG GCAAGGATTA CGAGAAGCCC
GAATTCAACC TGCACAGTGT GGATGTGGGC GGCGTTGACG TGACCATCCG CGAGCGCGTC
GAAGTGGACA AGCCGTTTTG CGAGCTGCGC CGCTTCAAGC GCTTCTCCGA CGACACCGAT
ACGCTGCAGA CCATGCTGAG CCAGCCCGTG GTGCTGATCG TGGCGCCGCT GTCGGGCCAC
TACGCCACGC TGCTGCGCGA TACGGTGCAA AGCATGCTGG GCGACCACAA GGTCTACATC
ACCGACTGGA AGAACGCCCG CCTGGTGCCC CTGGCCGATG GCGAGTTCCA CCTCGACGAC
TACGTGAACT ATGTGCAGGA GTTCATCCGC TACCTGCAGG GCAAATACGG CCAGTGCCAC
GTGGTCAGCG TGTGCCAGCC CACGGTGCCG GTGCTGGCAG CGGTGTCGCT GATGGCCAGC
CGTGGCGAGA CGCCCCCGCT GTCCATGACC ATGATGGGCG GCCCGATCGA CGCGCGCCGC
TCGCCGACCT CGGTGAACAA CCTGGCGCAG AACCGCAGCT TCGAGTGGTT CGAGAACAAC
GTGATCTACC GCGTGCCCGA AGGCTATCCG GGCGTAGGCC GCCGCGTGTA CCCGGGCTTC
CTGCAGTACT CGGGCTTCGT GGCCATGAAT CCGGACCGCC ACGCCAAGAG CCACTACGAC
TACTTCAAGG ACCTGATCAA GGGTGACGAC GCCAGCGCCG AGCATCACCG CAAGTTCTAT
GACGAGTACA ACGCCGTGCT CGACATGGAT GCCGACTACT ACCTCGAGAC CATCGCCACG
GTGTTCCAGG ACTACAAGCT GGTCCATGGC ACCTGGGAAG TGCGTTCGCC CGAAGGCCAG
GCCGAGCTGG TGCGCCCGCA GGACATCAAG GGCAGCGCCC TGCTGACCGT CGAAGGCGAG
CTGGACGACA TCTCCGGCTC GGGCCAGACG CGCGCAGCGC ACGATCTGTG CACGGGCATC
GCGGCAGAGC AGCGCAAGCA CCTTGAAGTG CCGGGCGCCG GACACTACGG GATTTTCAGC
GGCAGGCGCT GGAGAGAGAT CGTCTACCCG CAGGTGCGCG AGTTCATCAG TGCCCACCAG
CCCGAAAGCG CCACAGCCGC CAGCGCGGCA GGTCACACCA GCAGCCTGAG CGATGACGCG
CCCTCGGCCA CCGAGCAGCC GCGCAAGCGC GGTGCCAAGG TGCAGGCAGG CTGA
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| Protein sequence | MLYQLYEIQR AMVEPFADFA QAAAKLYSNP HSLLSQGPMS QRMAAGFDLF YRLGKDYEKP
EFNLHSVDVG GVDVTIRERV EVDKPFCELR RFKRFSDDTD TLQTMLSQPV VLIVAPLSGH
YATLLRDTVQ SMLGDHKVYI TDWKNARLVP LADGEFHLDD YVNYVQEFIR YLQGKYGQCH
VVSVCQPTVP VLAAVSLMAS RGETPPLSMT MMGGPIDARR SPTSVNNLAQ NRSFEWFENN
VIYRVPEGYP GVGRRVYPGF LQYSGFVAMN PDRHAKSHYD YFKDLIKGDD ASAEHHRKFY
DEYNAVLDMD ADYYLETIAT VFQDYKLVHG TWEVRSPEGQ AELVRPQDIK GSALLTVEGE
LDDISGSGQT RAAHDLCTGI AAEQRKHLEV PGAGHYGIFS GRRWREIVYP QVREFISAHQ
PESATAASAA GHTSSLSDDA PSATEQPRKR GAKVQAG
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