| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3593 |
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| Symbol | |
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| ID | 5749177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3949875 |
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| End bp | 3950882 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641298694 |
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| Product | patatin |
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| Protein accession | YP_001564612 |
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| Protein GI | 160899030 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0017391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0781992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTGA GTCCGCGCAA ACCCGTGGTC GGCCTGGCGC TGGGCAGCGG GTCGGCGCGT
GGCTGGGCGC ATTTCGGCGT GCTGCGCGCG CTGGAGGATG CGGGCCTGAG GCCCGACATC
ATCTGCGGCT CGTCCATCGG CGCCCTGGTC GGTGCCTCCT ATGCGGCTGG CGAGATGCAG
CGCTTCGAGG AATGGGTGCT GGGACTGGGC ATGCGCAAGG TGTTCGGTTT CATGGACTTC
AACATCACGG GCGGCATGCT CAAGGGCGAG AAGCTGATCG CGTTCTGGCG CGAGCACTTC
GTGGACTCGG CCATCGAGGA CCTGAAGATT CCCTTCGGCG CCGTGGCCAC CGACCTGCAT
TCGGGCGCCG AGGTCTGGCT GCGCAAGGGC TCCATCGCCG ATGCCGTGCG TGCCTCCATC
GCGCTGCCCG GCCTGTTCAC GCCCGTGCAG CGCGAGGGGC GGCTGCTGGT CGATGGCGGC
ATCGTCAACC CCGTGCCCGC CTCGCTGGCG CGCGCCATGG GCGCGGACAT CGTGATCGCG
GTCGATCTCA ATGCCGACAT CATGCGGCGC CACATGCGGC CGCTGGTTCC CTCCGCCGCC
ATGGCTGCCG CGCCGCCGCT GGAGGAAGCC CCGCCCGCCG TGGAGCAGGG CGTGGCGCCC
GAAGACCTGG CCGGCCAGGC CAGTGCCGTG GCCGGCACGG CCTGGGTGCG CAGGCTGCAG
CGCGGCGTGA TGGGGTGGAT GCCCGGCCAC CACCGCGACG AGGCAGGCCG CGAGACCGAG
CCCCCGCCCC GGCCCCCCTC GCTGCTGGAC GTGGTGATGA CCAGCGTCAA CATCATGCAG
ATGCGCATCA CGCGCAGCCG CATGGCGGGC GACCCGCCCG AGTTGGTGAT CGCGCCGCGC
CTGTCCCACC TGGGCCTGCT GGACTTCCAC CGCGCGCGCG AGGCCATCGA CGAAGGCTAC
GAGGCAGCGC AGGCCGCGTT GCCGGGCCTG CGCCACTGGG GCCTTTGA
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| Protein sequence | MALSPRKPVV GLALGSGSAR GWAHFGVLRA LEDAGLRPDI ICGSSIGALV GASYAAGEMQ
RFEEWVLGLG MRKVFGFMDF NITGGMLKGE KLIAFWREHF VDSAIEDLKI PFGAVATDLH
SGAEVWLRKG SIADAVRASI ALPGLFTPVQ REGRLLVDGG IVNPVPASLA RAMGADIVIA
VDLNADIMRR HMRPLVPSAA MAAAPPLEEA PPAVEQGVAP EDLAGQASAV AGTAWVRRLQ
RGVMGWMPGH HRDEAGRETE PPPRPPSLLD VVMTSVNIMQ MRITRSRMAG DPPELVIAPR
LSHLGLLDFH RAREAIDEGY EAAQAALPGL RHWGL
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