Gene Daci_3591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3591 
Symbol 
ID5749175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3946370 
End bp3947716 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content71% 
IMG OID641298692 
ProductZipA 
Protein accessionYP_001564610 
Protein GI160899028 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0210029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0561961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACC TGCAAATCAG TCTGGCCGTC CTGGGCTTTG TGGTGCTGGC CCTGATCATT 
GCCTACAACA GCTGGTCCGC GCGCCGCAAT GCACCCAAGC GCGCCGACCC CGTCGATGAA
GCGCAGCGCG ATCCCTCGCG CCATGAGCCC GGCATGGACA CCGTGGGCCA CGGCCCGGAC
CTGACGCACA GCCTGCGCGA GCCCGTGCTG GGCGACTTCG GCTCCGCCGC GCCGGGCCAG
AGCCCCGCCT CTGTGGACCG CTTCGCCGAA ACCGACGCCG AGCTGGCCCA TCTGGTCCAG
CTCGAAGAGC AGCAGCGCCA GGCCGCGGCC CAGGCTGCGC TGGCTGCCAA GGCCGCCCAG
GCAGTGCAGT CCGCGCAGGC CGCCCATGCC CTGCAGGCGG GCGAAGACGC CAGCGCTTCG
GCACCCGCAT CTGAATCTGT GTCCGTGCCT GCGGCGTCCC CGTCGGCACC GCAGTCCATC
GAGCCTTCCC TCAACGACGC GGCCCTGACC AGCGCGGCCG CCAGCCGCCC GGGTTTGGAT
GCGCTGATCG ACGCCATTGC CCCCGTGCAG GTCGGCCAGG CCGTGCCTGG CGAACTGGCG
CTGCAGGCCC AGCCCGCCAC GCGGCGCGCG GGCAACAAGC CCTTTGCGAT CGAGGGCATG
AACCAGTCCA CCCACCAGTG GGAGCCGCTG CAGCCCGGCC AGCGCTACCT GGGCTTCCAG
GCCGGCGTGC AGCTGGCCAA CCGCACGGGT GCGCTCAACG AGATCGAGTT CTCCGAGTTC
GTTGCCAAGG TGCAGCGCTT TGCCGACGCG CTGGGCGCCA CGCCCGACGT GCCCGACATG
CTGCAGGAAG TGGCGCGAGC GCGCGAGCTC GACCAGTTCG CCAGCGAGCA CGACGCCCAG
CTCACCTTCA TGCTGCGCGC ACGCCAGGCC TCCTGGAGCG CGGGCTACGT GCAGCAGAAC
GCATCGCGCC AGGGCTTTCT GCCGGGCTCC ATGCCCGGGC GCATGGCCCT GCCTTCGCCC
ACGCCCGGCA TGCCGCCGGT GCTGGTGCTC AACTACGACC CGCAGGCGGC GATGGCCGAC
GACCTGGACA CCTCGGTGGT GCGCGAGTTC CTGCTGAGCC TGGACGTGCC CCAGGTGCCG
CGCGGCGAGC AGGCCTTCGT GCAGTTGCGC CAGGTGGCCG AGCGCCTGTG TCAGACCATG
GACGGCGTGC TCTGCGACCA GAACGGCTAC CTGCTGCCGG CCATGGCGCT GGACCCCATC
CAGCACGACC TGGAACATCT CTATGACAAG CTCGACAGCC GCGAGCTGTC GGCGGGCTCC
ATGCTGGCGC GGCGACTGTT CAGCTGA
 
Protein sequence
MSNLQISLAV LGFVVLALII AYNSWSARRN APKRADPVDE AQRDPSRHEP GMDTVGHGPD 
LTHSLREPVL GDFGSAAPGQ SPASVDRFAE TDAELAHLVQ LEEQQRQAAA QAALAAKAAQ
AVQSAQAAHA LQAGEDASAS APASESVSVP AASPSAPQSI EPSLNDAALT SAAASRPGLD
ALIDAIAPVQ VGQAVPGELA LQAQPATRRA GNKPFAIEGM NQSTHQWEPL QPGQRYLGFQ
AGVQLANRTG ALNEIEFSEF VAKVQRFADA LGATPDVPDM LQEVARAREL DQFASEHDAQ
LTFMLRARQA SWSAGYVQQN ASRQGFLPGS MPGRMALPSP TPGMPPVLVL NYDPQAAMAD
DLDTSVVREF LLSLDVPQVP RGEQAFVQLR QVAERLCQTM DGVLCDQNGY LLPAMALDPI
QHDLEHLYDK LDSRELSAGS MLARRLFS