Gene Daci_3574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3574 
Symbol 
ID5749158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3920555 
End bp3921136 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content60% 
IMG OID641298675 
Productsuperoxide dismutase 
Protein accessionYP_001564593 
Protein GI160899011 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0150898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00946106 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACATA CCTTGCCCCC TCTGCCCTAT GCGATTGACG CGCTGGCACC CCACTACAGC 
CAGGAAACGC TGGAGTACCA CCATGGCAAG CACCACAACG CCTATGTGGT GAACCTGAAC
AACCTGCAAA AGGGCACCGA ATTTGAAAAC ATGACCCTGG AAGAGATCGT CAAGAAGTCT
TCCGGCGGCA TCTACAACAA CGCAGCCCAG ATCTGGAACC ACACCTTCTT CTGGAACTGC
ATGGCCCCCA ACGGTGGCGG CGAGCCCACC GGCGCACTGG CTGACGCCAT CAACAAGAAG
TGGGGCAGCT ACGCCGCCTT CAAGGAAGCC TTCGTGAAGT CGGCCGTGGG CAACTTCGGC
TCGGGCTGGA CCTGGCTGGT CAAGAAGGCC GACGGTTCGG TGGACATCGT CAACACCGGC
GCCGCTGGCA CGCCCCTGAC CACGGAAGAC AAGGCCCTGC TGACCGTGGA CGTCTGGGAA
CACGCCTACT ACATCGACTA CCGCAACCTG CGTCCCAAGT TCGTCGAGAC CTTCCTCGGC
CAACTGGTGA ACTGGAAGTT TGCCGAGCAG AACTTCGCCT GA
 
Protein sequence
MEHTLPPLPY AIDALAPHYS QETLEYHHGK HHNAYVVNLN NLQKGTEFEN MTLEEIVKKS 
SGGIYNNAAQ IWNHTFFWNC MAPNGGGEPT GALADAINKK WGSYAAFKEA FVKSAVGNFG
SGWTWLVKKA DGSVDIVNTG AAGTPLTTED KALLTVDVWE HAYYIDYRNL RPKFVETFLG
QLVNWKFAEQ NFA