Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3572 |
Symbol | |
ID | 5749156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3917871 |
End bp | 3918503 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641298673 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_001564591 |
Protein GI | 160899009 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0594941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0034613 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGCTGTCGA TCATACAAGC CGCAGGCTGG CCGATCTGGC CACTGATTGC CTGCTCCATC CTGGCTCTGG CCCTGGTCTT TGAACGTTTC GTGGCGCTGA AAACGGCCCG CGTGGCGCCG CCCGCCCTGC TGGGCGAGGC GATTTCCGTG TCCTCGCGCG GCCTGCCCAG CCAGGAAGTC GTGCAGCAGC TGTCCCAGAA CTCCACGCTG GGCGAAGTCC TGGCAAGCGG ACTGCGCGCC CTGCAGGCTC ATCCGGACAG CAGCGAAGAA GAGCTTCGCG CCTCCATGGA AGGCGCCGGC CGCGCTGCTG CCCACACCCT GGAAAAGCAC CTGAGCGCGC TGGCCACCAT CGCCTCTGCA GCGCCTTTGC TGGGCCTGCT GGGCACGGTG ATCGGCATGA TCGAGATCTT CGGCTCGCAA GGCGGCGCAT CGGCCACCGG CGGCGGCAAC CCGGCGCAGC TGGCGGCCGG CATCTCCATC GCCCTGTACA ACACGGCCTT CGGCCTGATC GTCGCCATTC CGGCACTGAT CTTCTGGCGC TACTTCCGCG CCCGCGTCGA TGGCTACCTG CTGGGCATGG AGCTGGCTTC CGAGCAGTTC GTGCGCCACC TGGTGCGCGT CGGCGGCAAG TGA
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Protein sequence | MLSIIQAAGW PIWPLIACSI LALALVFERF VALKTARVAP PALLGEAISV SSRGLPSQEV VQQLSQNSTL GEVLASGLRA LQAHPDSSEE ELRASMEGAG RAAAHTLEKH LSALATIASA APLLGLLGTV IGMIEIFGSQ GGASATGGGN PAQLAAGISI ALYNTAFGLI VAIPALIFWR YFRARVDGYL LGMELASEQF VRHLVRVGGK
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