| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3527 |
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| Symbol | |
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| ID | 5749112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3872777 |
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| End bp | 3874324 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641298630 |
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| Product | ribonuclease |
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| Protein accession | YP_001564548 |
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| Protein GI | 160898966 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.255196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0164409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCCG GGCCGCCATG GCCGAGAAAT ACAAACGACA AAGCACACCA CAGGCACAGC
ATGCAGCAAG ACATTCTGAT CAATTGGTCG CCACAGGAAA CGCGCGTGGC CATCATCGAG
AACGGCGCCG TCCAGGAGCT GCACATGGAG CGCCCGCTGG AGCGCGGCCT GGTCGGCAAC
GTCTATCTGG GCAAGGTCTC GCGCGTGCTG CCGGGCATGC AGTCGGCCTT CATCGACATC
GGCCTGGAGC GCGCGGCCTT CCTGCATGTG GCCGATGTCT GGCAGCGGCA GGAAGGGGGC
GAGGCTCCCA TGTTCGCGCG CAAGGACATG CCTGTCGTGC CCATCGAAAA GCAGGTTTTC
GAAGGCCAGA CCATCATGGT GCAGGTCATC AAGGACCCGA TCGGCACCAA GGGCGCGCGC
CTGTCCACGC AGATCAGCAT TGCGGGGCGA TTGCTGGTGC TGCTGCCCCA GGATGACCAT
ATCGGCATCT CGCAGAAAAT CCCGCAGGGC GAGCGCGACG CGCTGCGCGC CCGCCTGCAG
GGCCTGGTGG GCACCAAGGA AACCGGCGGG GGCGGCGGCT TCATCCTGCG CACCAATGGC
GAGGACTCCA GCGACGCCGA GCTGGCCGAC GACATCCGCT ACCTGCGCAA GACCTGGAGC
CGCATCAAGG ACGCCTCCGT GCGCCTGCCG CCCATGTCGC TGCTGCACCA GGACCTGAAC
CTGCTGCAGC GCGTGCTGCG CGATCTGGTG GGCGAGGGCA CGCAGAGCAT CCGCATCGAC
TCCAAGGAGC AGTTCGCCCT GCTCATGACC TTCGGCCAGG AATACATGCC GGCGGCCGTT
CCCAAGCTGC AGCACTACCG CGGCGAGCGG CCCATCTTCG ACCTGTTCGC CATCGACGAG
GAAATCGCCC GCGCGCTGGG CCGCCGCGTG GACCTCAAGT CCGGCGGCTA CCTGATCGTG
GACCAGACCG AGGCGCTGAC TACGGTGGAC GTCAACACCG GCGGCTACGT GGGGGCGCGC
AACTTCGACG ACACCATCTT CAAGACCAAC CTGGAAGCGG CCCAGCAGAT CGCGCGCCAG
CTGCGCCTGC GCAACCTGGG CGGCATCATC ATCGTGGACT TCATCGACAT GGTGCGCGAC
GACCACCAGG CCGAGGTGCT GTCCGAATTC AAGCGCCAGC TCGGGCGCGA CCGCGTCAAG
ACCATGGCGG GCGGTTTCTC GCAGTTGGGC CTGGTGGAGA TGACGCGCAA GCGCACGCGC
GAATCGCTGG CCCACATGCT GTGCGAATCC TGCCCGGTCT GCCAGGGCAA GGGCCATGTG
AAGACCGTGC GCAGCGTCTG CTACGAGGTG CTGCGCGAAA TCCTGCGCGA GGCGCGCCAG
TTCAACCCGC GCGAGTTCCG CATCGTGGCC TCGCCCAAGG TGGTGGAGAT GTTCCTGGAC
GAGGAAAGCC AGCACCTGGC CGGCCTGTCC GACTTCATCA AGAAGCCCAT CTCGCTGCAG
GCCGAGACGG CCATGGCACA GGAGCAATAC GACATCGTGC TGCTGTGA
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| Protein sequence | MIAGPPWPRN TNDKAHHRHS MQQDILINWS PQETRVAIIE NGAVQELHME RPLERGLVGN
VYLGKVSRVL PGMQSAFIDI GLERAAFLHV ADVWQRQEGG EAPMFARKDM PVVPIEKQVF
EGQTIMVQVI KDPIGTKGAR LSTQISIAGR LLVLLPQDDH IGISQKIPQG ERDALRARLQ
GLVGTKETGG GGGFILRTNG EDSSDAELAD DIRYLRKTWS RIKDASVRLP PMSLLHQDLN
LLQRVLRDLV GEGTQSIRID SKEQFALLMT FGQEYMPAAV PKLQHYRGER PIFDLFAIDE
EIARALGRRV DLKSGGYLIV DQTEALTTVD VNTGGYVGAR NFDDTIFKTN LEAAQQIARQ
LRLRNLGGII IVDFIDMVRD DHQAEVLSEF KRQLGRDRVK TMAGGFSQLG LVEMTRKRTR
ESLAHMLCES CPVCQGKGHV KTVRSVCYEV LREILREARQ FNPREFRIVA SPKVVEMFLD
EESQHLAGLS DFIKKPISLQ AETAMAQEQY DIVLL
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