| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3517 |
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| Symbol | |
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| ID | 5749102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3863152 |
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| End bp | 3863853 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641298620 |
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| Product | hypothetical protein |
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| Protein accession | YP_001564538 |
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| Protein GI | 160898956 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000201859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.326196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCGC AATGGAAAGC AAAGGGCAAG GCGCTGGTCG CCGATGCCAA GGGAAAGCTG
TTTGGCAAGC TGGCCAAGGA AATCATCGTC GCGGCGCGCG CCGGCGCCGA TCCGGCAGGC
AACTCGCGCC TGCGCATGGC CGTGGAAGCC GCCCGCAAGG CCTCCATGCC CAAGGACACG
CTCGAGCGTG CGATCAAGAA GGGCTCGGGC GTGGGTGCCG ATGCCGTCAA CTACGAGCGC
GTGGTCTATG AAGGCTACGG CCCCAACCGC GTGCCCGTGA TGATCGAGTG CCTGACCGAC
AACGTGAACC GCACGGCGCC CAACATGCGC GTGTGTTTCC GCAAGGGCCA GATGACGGCC
GTGGCCTGGG ACTTCGACCA TGTGGGCATG ATCGAGGGCG AGCCCGAAGG CGGTGCCGAT
GCCGAGCTGG CCGCCATCGA GGCCGGCGCA CAGGACTTCG AGCCCGGCGA GGAAGAGGGG
ACGACGCTGT TCATCACCGA CCCGACGGAC CTGGATACCG TGAGCAAGGC GCTGCCGGCC
CAGGGCTTCA AGGTGCTGTC GGCCAAGCTG GGCTACAAGG CCAAGACGCC GGTCAGCATG
GCCAGCCTGT CGGCCGAGCA GCAGGAGGAA GTGCAGGACT TCCTGGCCGG CATCGAGAAC
GATGACGACG TGCAGCACGT CTATGCGGGG CTGGTGGATT GA
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| Protein sequence | MGAQWKAKGK ALVADAKGKL FGKLAKEIIV AARAGADPAG NSRLRMAVEA ARKASMPKDT
LERAIKKGSG VGADAVNYER VVYEGYGPNR VPVMIECLTD NVNRTAPNMR VCFRKGQMTA
VAWDFDHVGM IEGEPEGGAD AELAAIEAGA QDFEPGEEEG TTLFITDPTD LDTVSKALPA
QGFKVLSAKL GYKAKTPVSM ASLSAEQQEE VQDFLAGIEN DDDVQHVYAG LVD
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