| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3501 |
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| Symbol | |
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| ID | 5749086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3843435 |
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| End bp | 3847019 |
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| Gene Length | 3585 bp |
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| Protein Length | 1194 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641298604 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_001564522 |
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| Protein GI | 160898940 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.173702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTGA ACGGGTCCCG GCCTTGCGGA GCTTTCTACA ATGGCGCCCA TATGTTTGTC
CATTTGCGCC TGCACACCGA ATTCTCCGTC GTGGACGGAA CCAACCGCAT CAATGCCATC
GTCAAGGCCG CCGCCGAGGA CGGGCAGGTC GCACTGGCCG TCACAGACTT CAACAACCTG
TTTGGTGGCG TCAAGTTCTA CCGCGAAGGG CGGGCCAAGG GCGTCAAGCC CGTGCTGGGC
GCGGAAATCC AGATCGAAGG CGAGAACGGT GCCGCCGTCT CGCGCATCAT CGTGCTGGTG
CAAAGCCCGC TGGGCTACCA CAACCTGTCC GAACTGCTGG CCCGTGGCTG GACCCGCAAC
GTGGTCAAGG GCCAGGCCGT GCACACCTGG GCCTGGCTGC AGGAGCTGGG CGAGGGGCTG
ATCGTGCTGG CCGGGGCCCA GGCCGGCCCC GTGGGCCAGG CGCTGATGCG CGGCGACGAG
GCCGGCGCAG CCGCCGTGGC CCAGCGGCTG GCGAGCATGT TCCCGCACCG CTTCTTCATC
GAATTGCAGC GCGCAGGCCG GCCTGACGAC GAAGCCCATG TGCTGGCCGC CGTGCAGCTG
GCCGATCGCC TGAACCTGCC CGTGGTCGCC ACGCACCCCA TACAGTTCTT CGGTCCCGAC
GACTACGAAG CGCACGAGGC GCGCGTGTGC ATCGCCGAGG GTGAGATCCT GGCCAACCCG
AAGCGCGTGC GCCGCTTCAC GCGAGACCAG CATTTCAAGA CCGCCGCGCA GATGCAGGCG
CTGTTCGCCG ACATTCCCAG CGCCATTGCC AACACCGTGG AAATCGCGCG CCGCTGCAGC
CTGACCCTGG TGCTGGGCAA GCCGCAGCTG CCCAATTTCC CCGTGCCTGA CGGCATGACC
ATGGACGAGT TCTTCCGCAG CGAATCCTTC AACGGCCTGG AAGACCGCCT GACCCACCTG
TATCCCGATC CCGCCAAGCG CGAGGCGCAG CGCCCGCGCT ACGTGGAACG GCTGGAGTTC
GAGATCGGCA CCATCCTCAA GATGGGCTTT CCGGGCTACT TCCTCATCGT GGGCGACTTC
ATCAAGTGGG CCAAGCTCAA CGGCTGCCCC GTGGGCCCGG GCCGCGGATC GGGCGCGGGC
TCGCTGGTGG CCTACGTGCT CAAGATCACG GACCTGGACC CGCTGGAATA CAACCTGCTG
TTCGAGCGCT TCCTGAACCC CGAGCGCGTG TCCATGCCCG ACTTCGACGT GGACTTCTGC
CAGGCCAACC GCGACCGCGT CATCGACTAT GTGAAGCAGC TCTATGGCCG CGACGCCGTC
AGCCAGATCG CCACCTTCGG CACCATGGCC GCGCGCGCGG CCATCCGCGA CGTGGGCCGC
GTGCTGGACA TGAGCTACAC CTTCTGCGAC GGCATCTCCA AGCTCATTCC CAACAAGCCG
GGCCTGCACG TCACGCTCAA ATACCCGCCC AATCCGAAGA AGGAGGGCGA CAAGTACACC
TACGCCATCG AGGCCGAGCC CATGCTGGCC GAGCGCATCG AAAAAGAAGA AGACGTCAAG
ACCCTGATCG AAATGGCCCA GAAGCTCGAA GGCATGACTC GCAACATCGG CATGCACGCG
GGCGGCGTGG TGATCGCTCC GGGCAAGCTG GCCGACTTCT GCCCGCTGTA CCAGCAGCCG
GGCAGCGACT CGGCCGTGGC CATGTACGAC AAGGACGATG TGGAGGCCGT GGGCCTGGTG
AAGTTCGACT TTCTGGGCCT GGCCACGCTG ACCATCCTGG AGATCGCGCG CGAGTTCATC
ATCAAGCGCC ACAAGGGCCA GGAGAACTTC GCCTTCGAGA ACATCCCACT GGACGACGCG
CGGACCTACC AGCTGTTTTC CGAGGGCAAG ACCGAAGCCG TGTTCCAGTT TGAATCGCGC
GGCATGCAGG GCATGCTGCG CGACGCCAAG CCCAGCCGCC TGGAAGACCT GATTGCACTG
AACGCGCTGT ACCGCCCGGG CCCCATGGAC CTGATCCCCA GCTTCGTCGC GCGCAAGCAC
GGCAAGGAAG TGGTGGAGTA CCCGCACCCG CTGGTCGAGC AGGTGCTGGC CGAGACCTAC
GGCATCATGG TCTACCAGGA GCAGGTGATG CAGACCGCCC AGGTGCTGGG CGGCTACTCG
CTGGGCGGCG CCGACCTCTT GCGCCGAGCC ATGGGCAAGA AGAAGGTCGA GGAAATGGTC
ATGCACCGCG GGATCTTCCG CGAGGGCGCG GCCAAGCAGG GCATCAGCGA GGAAAAGGCC
GACGAGGTCT TCGACCTGAT GGAGAAGTTC GCGGGCTACG GCTTCAACAA GTCGCACGCC
GCCGCCTACT CGCTGCTGGC CTACCACACG GCCTGGCTCA AGGTGCACTA CACGGCCGAG
TTCTACTGCG GGAACATGAC CGTGGAAATG GACAACACCG ACAAGCTCAA GGTGTTGTAC
GAAGACGCGC TCAAGATGGG CATCAGCTTC GAGCCGCCGG ACGTCAACCG CGGCATGTAC
CGATTCGAGC CCGTCACCGA CAAGGTCATC CGCTACGGCC TGGGCGCCAT CAAGGGCACG
GGCCAGCAGG CCATCGAGGC CATCGTTGCG GCGCGTGAAG GCCGCGGCGT GGGGCCGCGC
GGCGCCGACA AGGGACCTTT CAAGAGCCTG GCCGACTTCT GCGTGCGCGT GGACCGCACG
CGCCTGAACA AGCGCACGCT GGAAGCCCTG ATCAAGGGCG GCGCCTTCGA CGCCATCGAG
CTCAACCGGG CGTCGCTGGT GGCCTCCATC GACCATGCCT TCGAGTTCGG CAACAAGACG
CTGGCCAACG CCAACCAGGG CGGCTTGTTC GACATGATGG GCGATGACGC CGTGGGCTCC
AGCACCCAGG AGCCGCCGCT GGTCGAGGCA CTGCCCTGGG GCGTGAAGGA GCGGCTGACC
CAGGAAAAGA CGGCGGTGGG CTTCTACCTC TCGGGCCACC TGTTCGACGA GGTCGAGAAA
GAGGTGCGCC GCTTCGTGCG CACGCCCCTG GCCGAGCTGC GCGACAGCCG CGAGCCCCAG
ACGCTGGCCG GCATCATCAG CGACTTCCGC GCCATCAATG GCCAGCGCGG GAGGCTGGGC
CTGTTCAAGA TCGATGACGG CTCGGGCGTG ATCGAGGCCT CGGTGGACGA GAACACGCTC
AACACCTACC GCGAACTGCT CAAGGACGAT GAATTCGTCG TCATCACCGG GCGCCTGCAG
CTGGACCATT TCAGCGGCGG CCTGCGCATG AAGGCCCAGC AGCTGTGGAA TCTGGCAGAC
GCGCGCTGCC GCTTTGCGCG CTATCTGCAG GTCAGCGTGG GCGAGAAGAT GCCTGACGTG
CTTGGCCTGC TGCGCCAGTT CCCCGCCGTG GTGGAGCAGG GCGAGCACGG CGAGCTGCAG
CGCGGCATGA AAGTGCGCCT GGGCCTGGTC TGCGAGGACG AGCGCGGCTC GGCCAGCTGC
GAGCTGGCGC TGGGCGATGC CAGCCGCTTC TATCCCAGCG ATGCGGCCCT GGCGGCTTGG
TACGCCCAGG CCGGCAGTGC ACAGGTCAAG GTGGTCTACG AATAA
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| Protein sequence | MAVNGSRPCG AFYNGAHMFV HLRLHTEFSV VDGTNRINAI VKAAAEDGQV ALAVTDFNNL
FGGVKFYREG RAKGVKPVLG AEIQIEGENG AAVSRIIVLV QSPLGYHNLS ELLARGWTRN
VVKGQAVHTW AWLQELGEGL IVLAGAQAGP VGQALMRGDE AGAAAVAQRL ASMFPHRFFI
ELQRAGRPDD EAHVLAAVQL ADRLNLPVVA THPIQFFGPD DYEAHEARVC IAEGEILANP
KRVRRFTRDQ HFKTAAQMQA LFADIPSAIA NTVEIARRCS LTLVLGKPQL PNFPVPDGMT
MDEFFRSESF NGLEDRLTHL YPDPAKREAQ RPRYVERLEF EIGTILKMGF PGYFLIVGDF
IKWAKLNGCP VGPGRGSGAG SLVAYVLKIT DLDPLEYNLL FERFLNPERV SMPDFDVDFC
QANRDRVIDY VKQLYGRDAV SQIATFGTMA ARAAIRDVGR VLDMSYTFCD GISKLIPNKP
GLHVTLKYPP NPKKEGDKYT YAIEAEPMLA ERIEKEEDVK TLIEMAQKLE GMTRNIGMHA
GGVVIAPGKL ADFCPLYQQP GSDSAVAMYD KDDVEAVGLV KFDFLGLATL TILEIAREFI
IKRHKGQENF AFENIPLDDA RTYQLFSEGK TEAVFQFESR GMQGMLRDAK PSRLEDLIAL
NALYRPGPMD LIPSFVARKH GKEVVEYPHP LVEQVLAETY GIMVYQEQVM QTAQVLGGYS
LGGADLLRRA MGKKKVEEMV MHRGIFREGA AKQGISEEKA DEVFDLMEKF AGYGFNKSHA
AAYSLLAYHT AWLKVHYTAE FYCGNMTVEM DNTDKLKVLY EDALKMGISF EPPDVNRGMY
RFEPVTDKVI RYGLGAIKGT GQQAIEAIVA AREGRGVGPR GADKGPFKSL ADFCVRVDRT
RLNKRTLEAL IKGGAFDAIE LNRASLVASI DHAFEFGNKT LANANQGGLF DMMGDDAVGS
STQEPPLVEA LPWGVKERLT QEKTAVGFYL SGHLFDEVEK EVRRFVRTPL AELRDSREPQ
TLAGIISDFR AINGQRGRLG LFKIDDGSGV IEASVDENTL NTYRELLKDD EFVVITGRLQ
LDHFSGGLRM KAQQLWNLAD ARCRFARYLQ VSVGEKMPDV LGLLRQFPAV VEQGEHGELQ
RGMKVRLGLV CEDERGSASC ELALGDASRF YPSDAALAAW YAQAGSAQVK VVYE
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